| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3981 |
|---|
| Symbol | |
|---|
| ID | 4024498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 4428912 |
|---|
| End bp | 4429235 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637964184 |
|---|
| Product | helix-turn-helix, type 11 |
|---|
| Protein accession | YP_571101 |
|---|
| Protein GI | 91978442 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0640] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCA TGGACGAAGT CTTCAAAGCG CTGGCCGACG CGTCGCGGCG CGCGCTGCTG
GACCGGCTGC ACGCCCGCAA CGGGCAGACG CTGAGCGAAC TCTGCGATGG CCTGGCCATG
ACGCGGCAGG CCGTCACCAA GCACCTGGCG ATTCTCGAAG CGGCCAATCT GATTTCGACG
CTGAAACACG GCCGCGAAAA GCTGCACTAC CTGAATCCGG TGCCGATCCA CGAGATCGGC
GCGCGCTGGA TCAGCAAGTT CGAGCGCGGC CGGCTGGTTG CGCTCGCCGA CCTGAAACGC
AAACTGGAGG CGCGTGATGA GTAA
|
|---|
| Protein sequence | MTPMDEVFKA LADASRRALL DRLHARNGQT LSELCDGLAM TRQAVTKHLA ILEAANLIST
LKHGREKLHY LNPVPIHEIG ARWISKFERG RLVALADLKR KLEARDE
|
|---|
| |