Gene RPD_3954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3954 
Symbol 
ID4024470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4402532 
End bp4402771 
Gene Length240 bp 
Protein Length79 aa 
Translation table11 
GC content55% 
IMG OID637964156 
Producthypothetical protein 
Protein accessionYP_571074 
Protein GI91978415 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTCGGTC ACTCAAACGG CTCTGTTACC AGCAAATACA TCCATGCGCT CGACACCGTG 
CTGATCATGG CGGCGGATAC AATCGCCGGG TACATAGATG GCCTCATGAA CGGGAAAGAA
TTTAAACAAA CCGCATACGC TCTGGATCGC GATTCCCGTA AAGTTGCTCT TGCGCGCTTC
CTTTGCATGG CGGAGGGAAC GGAGAGCGAC GGTGCCGGCG AGGAGCGTCT TGCTGCATAG
 
Protein sequence
MVGHSNGSVT SKYIHALDTV LIMAADTIAG YIDGLMNGKE FKQTAYALDR DSRKVALARF 
LCMAEGTESD GAGEERLAA