8 homologs were found in PanDaTox collection
for query gene RPD_3954 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007958  RPD_3954  hypothetical protein  100 
 
 		 79 aa  161  3e-39  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011365  Gdia_2770  integrase family protein  76.25 
 
 		 452 aa  118  3e-26  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.251515  normal  1 
 
 
-
 
NC_009511  Swit_0154  phage integrase family protein  67.09 
 
 		 451 aa  110  6e-24  Sphingomonas wittichii RW1  Bacteria  normal  0.543339  normal  1 
 
 
-
 
NC_008254  Meso_3806  phage integrase  69.62 
 
 		 451 aa  106  9.000000000000001e-23  Chelativorans sp. BNC1  Bacteria  normal  0.0304559  n/a   
 
 
-
 
NC_009485  BBta_7820  putative phage integrase  74.24 
 
 		 451 aa  103  1e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009720  Xaut_0620  integrase family protein  67.11 
 
 		 452 aa  98.2  3e-20  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_4157  integrase family protein  44.19 
 
 		 432 aa  47.4  0.00006  Caulobacter sp. K31  Bacteria  normal  0.225884  normal  0.636127 
 
 
-
 
NC_010172  Mext_1864  integrase family protein  44.23 
 
 		 429 aa  44.7  0.0004  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
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