Gene RPD_3858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3858 
Symbol 
ID4024374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4297019 
End bp4297363 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content64% 
IMG OID637964062 
Productputative formamidase regulatory protein FmdB 
Protein accessionYP_570980 
Protein GI91978321 
COG category 
COG ID 
TIGRFAM ID[TIGR02605] putative regulatory protein, FmdB family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTCT ATGAATATAT GTGTGACGCC TGCGGGCCGT TCACGGATAT GCGGCCGATG 
TCCGAATGCG ACGCGCCGCA ACTCTGCCCG ACCTGCGACG AGGAATCGCC GCGGGTAATT
CTCACCGCGC CGAACTTCTC CTGCATGCCC ACCTCGAGCC GCAAGGCGCA CGCCACCAAC
GAGCGCAGCA AGAACGCGCC GATGAGCGTC GGCGAATACA AGGCCAAGCA CGCCCCTGGC
TGCGGCTGCT GCTCCGGCCT AAAGAAGCCG GCGCGATTTC AGACCCGCAC CAAGAGCGGC
GCCAAAGGCT TCCCGACTGC GCGGCCCTGG ATGATCAGCC ACTGA
 
Protein sequence
MPVYEYMCDA CGPFTDMRPM SECDAPQLCP TCDEESPRVI LTAPNFSCMP TSSRKAHATN 
ERSKNAPMSV GEYKAKHAPG CGCCSGLKKP ARFQTRTKSG AKGFPTARPW MISH