Gene RPD_3834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3834 
Symbol 
ID4024350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4271613 
End bp4272140 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content59% 
IMG OID637964038 
ProductFerritin and Dps 
Protein accessionYP_570956 
Protein GI91978297 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0783] DNA-binding ferritin-like protein (oxidative damage protectant) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.183846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAAAG TCAAATCAGC TTCCATCGCC CCCGAACTCG ACACCCCGAC TGATCTGCCG 
CAGCAGTCCG TCGACAAGAT CTCCGCTACG CTCAACACGC TGCTCGCCGA CGCCTTCGCG
CTGTATCTGA AGACGAAGAA CTTCCACTGG CATGTCAGCG GCCGGCATTT CCGCGACTAT
CATCTCTTGC TCGACGAGCA GTCCGAACAG ATCTTCGCCA CGACCGATGC GCTGGCGGAA
CGAGTCCGCA AGGTCGGCGG CGTGACGCTG CGTTCGATCG GCCACATCGC CAAGCTGCAA
ACGATCGAAG ACAACAACGA GGACTACGTC CCGCCGCGCG AAATGCTGCG CGAGCTCATG
AATGACAACA AGAAAATGGC AGCGGCGATG CGCAAGGCGC ACAAGATCGT CGACGATTGC
GAAGACGCTG CGAGCGCCGG GCTGCTGGAG AATTTTATCG ACGAAACCGA GCGCCGGACC
TGGTTCCTGT TCGAAGCCAG TCGCCAGGAA AGCAGCAACG AAGCATAA
 
Protein sequence
MTKVKSASIA PELDTPTDLP QQSVDKISAT LNTLLADAFA LYLKTKNFHW HVSGRHFRDY 
HLLLDEQSEQ IFATTDALAE RVRKVGGVTL RSIGHIAKLQ TIEDNNEDYV PPREMLRELM
NDNKKMAAAM RKAHKIVDDC EDAASAGLLE NFIDETERRT WFLFEASRQE SSNEA