Gene RPD_3776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3776 
Symbol 
ID4024292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4214835 
End bp4215332 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content67% 
IMG OID637963980 
Producthypothetical protein 
Protein accessionYP_570898 
Protein GI91978239 
COG category[S] Function unknown 
COG ID[COG2343] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0718949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0555317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGAC CCAGGCGCGA CAAGCCCGCG AGCGGCCAGG AATCGGTGTG GGACTATCCG 
CGCCCGCCGC GGCTGGAACG GACGGATGCG CGACTGCGCG TGGTGTTCAA CGGCGAGATG
ATCGCCGATA GCAGTTCGGG ATTTCGCGTG CTCGAGACCA GTCACCCGCC GGTCTATTAC
ATTCCGCAGG CCGACATCCG GATCGACCTG ATGCGCCCGG CGCCGGGCCG ATCCTGGTGC
GAATTCAAGG GCGAGGCAGG CTACTGGTCG ATCGAAGCCG GCGGCCGGCG GTCCGACAAC
GCCGCCTGGA GTTATGCGGC GCCCTCCCCG GCCTTCGCGG CGATCGCAGG CCACCTCGCT
TTTTACGCTT CGCGGGTCGA CGAATGTTTC GTCGGCGACG AACGCGTGCA GCCGCAGCCC
GGCGATTTCT ACGGCGGCTG GATCACCTCG ACAATCGCCG GCCCGTTCAA GGGCGGCGCA
GGAACGCGCG GATGGTAG
 
Protein sequence
MFGPRRDKPA SGQESVWDYP RPPRLERTDA RLRVVFNGEM IADSSSGFRV LETSHPPVYY 
IPQADIRIDL MRPAPGRSWC EFKGEAGYWS IEAGGRRSDN AAWSYAAPSP AFAAIAGHLA
FYASRVDECF VGDERVQPQP GDFYGGWITS TIAGPFKGGA GTRGW