| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3747 |
|---|
| Symbol | |
|---|
| ID | 4024263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 4184688 |
|---|
| End bp | 4185581 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637963951 |
|---|
| Product | bacteriochlorophyll/chlorophyll a synthase |
|---|
| Protein accession | YP_570869 |
|---|
| Protein GI | 91978210 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | [TIGR01476] bacteriochlorophyll/chlorophyll synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00138219 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAACA CCCTGGTCGT ACGTCCGGCC GCGACCGACG TGCTCGAATT GCTGAAGCCG
ATCACCTGGT TTCCGCCGAT GTGGGCGTTC GGGTGCGGCG TGGTGTCGTC GGGCGAGCCG
CTGTCGCAGC GCTGGCCGCT GGTGATCGCC GGCATCATCC TCGCCGGTCC GATGCTGTGC
GGCATGAGCC AGGCGGTGAA CGACTGGTAC GACCGGCATG TCGACGCCAT CAACGAGCCG
AATCGTCCGA TTCCGTCGGG ACGGATCCCG GGCAGTTGGG GCTTCTACAT CGCGGTCGCA
TGGTCGGTGC TGTCGATGAT GCTCGCGGCC ACGCTGGGGC CGTGGGTGTT CGTTGCCGCG
GCACTCGGCC TGGTGATGGC GTGGGCCTAC AGCATGCCGC CGGTCCGTTT GAAGCAGAAC
GGATGGTTCG GTAACGCGGC CTGCGGCCTG GCTTACGAGA GCCTGCCTTG GTTCACCGGC
GCCGCCGTGA TGTCGGCTTC GATACCGGAC TGGCGCATCA TCGTCGTCGC GCTGCTCTAC
GGCATTGGCG CTCACGGCAT CATGACGCTG AACGACTTCA AGGCGATCGA TGGCGACAAA
AAGATGGGCG TCAATTCGCT GCCGGTGCTG CTCGGCGCCG AGAACGCCGC CCGGTTGGCC
TGCGTAGTCA TGGCGGTGCC GCAGCTCGTC GTGGTGGCGC TGCTGTTCGC CTGGGACCGG
CCATATTACG CGATCGCTGT GTCCGCGCTG CTGGTGCTGC AGCTCGGCTT CATGTCGCAC
CTGCTGAAGG CCCCACGCGA GCGCGCGCCG TGGTATAATG GGACCGGCGT CTCGAGCTAT
GTGCTCGGTA TGCTGGTCAG CGCCTTCGCG CTGTCCTCGA TCGGAGGGTC ATGA
|
|---|
| Protein sequence | MSNTLVVRPA ATDVLELLKP ITWFPPMWAF GCGVVSSGEP LSQRWPLVIA GIILAGPMLC
GMSQAVNDWY DRHVDAINEP NRPIPSGRIP GSWGFYIAVA WSVLSMMLAA TLGPWVFVAA
ALGLVMAWAY SMPPVRLKQN GWFGNAACGL AYESLPWFTG AAVMSASIPD WRIIVVALLY
GIGAHGIMTL NDFKAIDGDK KMGVNSLPVL LGAENAARLA CVVMAVPQLV VVALLFAWDR
PYYAIAVSAL LVLQLGFMSH LLKAPRERAP WYNGTGVSSY VLGMLVSAFA LSSIGGS
|
|---|
| |