| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3735 |
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| Symbol | |
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| ID | 4024251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4171452 |
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| End bp | 4173059 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963939 |
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| Product | light-independent protochlorophyllide reductase subunit B |
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| Protein accession | YP_570857 |
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| Protein GI | 91978198 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01278] light-independent protochlorophyllide reductase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.334168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00212976 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGCTCA CCGTCTGGAC CTATGAAGGA CCTCCCCATG TCGGCGCGAT GCGCGTCGCC
ACCGGCATGG AAGGGCTGCA TTACGTGCTG CACGCCCCGC AGGGCGACAC CTACGCCGAT
CTGCTGTTCA CCATGATCGA GCGTCGCAAC AAGCGGCCGC CGGTGACCTA CACCACGTTC
GCCGCGCGAG ATCTCGGCAA GGACACCGCC GAACTGTTCA TGAAGGCCGC GCGCGACGCC
TATGAGCGCT TCAAGCCGCA GGCGATGATT GTGGGCGCAT CGTGCACCGG TTCGCTGATC
CAGGACGATC CGGGCGGGCT TGCGAAATCG CTGGGCTTCC CGATCCCGGT GGTCGCGATC
GATCTGCCGG CCTATCAGCG CAAGGAAAAC TGGGGCGCGG CCGAGACCTT GTACCAGCTC
GTTCGCGCGC TGGCCGGCCC GAAGGCGCCG GCGCCCGGCG CCAAGCGGCC TGAGCGCGCA
CCGGGCGTCC GCCCGACCTG CAATCTGCTC GGACCCACCG CGCTCGGCTT CCGCCATCGC
GATGACATCA CCGAGATCAC CGGACTGCTC GGCAAGCTCG GCATCGACGT CAACGTCGTC
GCTCCGATGG GCGCAACGCC GGCGGATATT GCGCGGCTCG GCGACGCGGA CTTCAACGTC
GTGATGTATC CGGAGATCGC CGGGCAGGCG GCGTCCTGGT TGCACCGCAT CTTTCATCAG
CCGTTCACCA AGACGGTGCC GATCGGCGTC TCCGCGACTC GCGACTTCAT CAAGGAAGTC
GCTCAACTCG CCGGCGTCGA TGCAACGGCG GTGCTGGAGG CGGCGTCGAC CCGATTGCCG
TGGTACTCGC ATTCGGTCGA CTCGACTTAT CTGACCAACA AGCGCGTGTT CATCTTCGGC
GACGCGACGC ATGCGATCGC CGCGGCGCGG ATCGCATCGG AGGAGCTCGG CTTCAAGGTG
GTCGGGCTCG GCAGCTACAG CCGGGAGTTC GGCCGCGAGC TGCGCGAGGC CGCCAAGCAC
TACGACGTCG AGCCGCTGAT CACCGACGAT TATCTCGAGG TCGAGGCCAA GGTCGCGGAA
CTGCATCCCG AATTGGTGCT CGGCACCCAG ATGGAGCGCC ACATCGCCAA ACGGCTTGGC
GTCCCCTGTG CGGTGATTTC GGCGCCGGTG CACGTCCAGG ACTTCCCGGC GCGCTACGCG
CCGCAGATGG GCTTCGAAGG CGCCAACGTG ATCTTCGATA CCTGGGTCCA CCCGCTGATG
ATGGGCCTCG AAGAACATCT GCTGACGATG TTCAAGGACG ATTTCGAATT CAAGGACGGC
GCGATGCCGT CGCATCTCGG CACCGGCCAC GCCGCGCCGG TCGCGGAAGT GATCGCGGAG
TCGGCACCGC CTGCGGTTGC CGCGACTGCG CCCGAAATTG TGTCAGTCGC CAATGCGGCC
GCATCTGCTG CCGTTTGGGC GCCTGAAGCC GAGAAGGAAC TGCAGAAGAT ACCGTTCTTT
GTTCGCGGAA AAGCCCGCCG GAATACCGAG CGATTCGCCA ACGAGAATGG CGTCGCAACC
ATCACCGTCG AGACCTTGTA CGATGCCAAA GCGCACTTCG CACGCTGA
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| Protein sequence | MQLTVWTYEG PPHVGAMRVA TGMEGLHYVL HAPQGDTYAD LLFTMIERRN KRPPVTYTTF
AARDLGKDTA ELFMKAARDA YERFKPQAMI VGASCTGSLI QDDPGGLAKS LGFPIPVVAI
DLPAYQRKEN WGAAETLYQL VRALAGPKAP APGAKRPERA PGVRPTCNLL GPTALGFRHR
DDITEITGLL GKLGIDVNVV APMGATPADI ARLGDADFNV VMYPEIAGQA ASWLHRIFHQ
PFTKTVPIGV SATRDFIKEV AQLAGVDATA VLEAASTRLP WYSHSVDSTY LTNKRVFIFG
DATHAIAAAR IASEELGFKV VGLGSYSREF GRELREAAKH YDVEPLITDD YLEVEAKVAE
LHPELVLGTQ MERHIAKRLG VPCAVISAPV HVQDFPARYA PQMGFEGANV IFDTWVHPLM
MGLEEHLLTM FKDDFEFKDG AMPSHLGTGH AAPVAEVIAE SAPPAVAATA PEIVSVANAA
ASAAVWAPEA EKELQKIPFF VRGKARRNTE RFANENGVAT ITVETLYDAK AHFAR
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