Gene RPD_3676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3676 
Symbol 
ID4024191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4102967 
End bp4103332 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content58% 
IMG OID637963880 
Productresponse regulator receiver 
Protein accessionYP_570799 
Protein GI91978140 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.284761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAT GTTTGGTGGT CGACGATTCG AGCGTCATTC GAAAAGTCGC AAGGCGAATT 
CTCGAGGGGC TCGACTTCGA GATCGTCGAG GCTGAAGACG GCGAGAAAGC GCTCGAGGTC
TGTAAGCACG GCCTTCCGGA CGCGGTGCTC CTCGACTGGA ACATGCCGGT CATGGACGGC
TACGAATTCC TGCGCAATCT GCGCCGGATG CCGGGCGGCG ATCAGCCAAA AGTCGTTTTC
TGCACCACTG AAAACGACGT CGCGCACATC GCGCGGGCGC TGCACGCCGG CGCCAACGAA
TACATCATGA AGCCGTTCGA CAAAGACATC GTGACGGCGA AGTTCCAGGA AGTCGGCCTT
ATCTGA
 
Protein sequence
MKTCLVVDDS SVIRKVARRI LEGLDFEIVE AEDGEKALEV CKHGLPDAVL LDWNMPVMDG 
YEFLRNLRRM PGGDQPKVVF CTTENDVAHI ARALHAGANE YIMKPFDKDI VTAKFQEVGL
I