Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3642 |
Symbol | |
ID | 4024156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4063699 |
End bp | 4064598 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637963846 |
Product | cation diffusion facilitator family transporter |
Protein accession | YP_570766 |
Protein GI | 91978107 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1230] Co/Zn/Cd efflux system component |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.5042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.259615 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGGCG GCGGATCGAC AGGAACGGCG GCGGCCAAGC ACGCGACGCG GCTGGCTTGG GCGTTGGGCC TGACGGCGAC CTACATGGTC GCCGAAGTGA TCGGCGGACT CGTTACGGGC AGTCTTGCCC TGCTGGCGGA CGCCGCGCAC ATGCTGACGG ACGTTGGTGG GCTCGGCCTC GCGCTGCTGG CCATCCGCTT CGCGGCCAAG GAAGCCACTC CGCAGCGGAC CTACGGCTAT CTGCGGATGG AAGTGCTATC GGCGTTGGCG AACGCCGTGG TCCTTCTGCT TCTCACGATC TACATTCTGT ACGAAGCCTA CCAGCGTTTC CAGGCGCCGC CGGAAATCCT CAGTGGGCCG ATGCTGATCG TGGCGACGAT CGGACTCTCC GTGAACCTCA TCAGCATGAA ACTGTTGGCC GGTGGTTCCT CGGAAAGTCT GAACGTAAAG GGGGCCTATC TCGAGGTGCT GGGCGACATG CTCGGTTCGA TCGGGGTGAT AGTGGCCGCG CTTCTCATGA TGTGGAAGGG CTGGGCGCTC GCCGACCCCA TCATCGGCGC GGGCATCGGG CTATTCATTG TCCCGCGGAC TTGGATACTG CTGAAGCAGG TGACGCATAT TCTAATGGAA GCGACCCCCG CCAACATCGA CGTCTCCGCG ATGGAGAAGC GTCTAACGGC CATCCCCGGC GTCTCCCGGG TGCACGACCT CCACGTTTGG ACCGTGACTT CGGGCTTCGA CTCGATGAGT TGCCATCTGG TCGTGGAGGA CATGTCGGTG TGGCGGGACG TGCTACGCGA AGCCCGCGTC ACGGTGCGGC GGGATTTCAA AATCGATCAC GTGACGATAG AGGTCGAACA CGGCGCGACT ATGGATGAGG AAGCCAAACT GCACGTATAG
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Protein sequence | MHGGGSTGTA AAKHATRLAW ALGLTATYMV AEVIGGLVTG SLALLADAAH MLTDVGGLGL ALLAIRFAAK EATPQRTYGY LRMEVLSALA NAVVLLLLTI YILYEAYQRF QAPPEILSGP MLIVATIGLS VNLISMKLLA GGSSESLNVK GAYLEVLGDM LGSIGVIVAA LLMMWKGWAL ADPIIGAGIG LFIVPRTWIL LKQVTHILME ATPANIDVSA MEKRLTAIPG VSRVHDLHVW TVTSGFDSMS CHLVVEDMSV WRDVLREARV TVRRDFKIDH VTIEVEHGAT MDEEAKLHV
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