| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3635 |
|---|
| Symbol | |
|---|
| ID | 4024149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 4057164 |
|---|
| End bp | 4057889 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637963839 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_570759 |
|---|
| Protein GI | 91978100 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2135] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.396245 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCAACC TCTATTCGAT GACGAAGAAC CAGGCCGCCA TCAGAAATCT GTTCAAGGTC
GATACCGACA GCGTCGGCAA TCTGCCCTCC ATGCCGGGTA TCTTCCCCGA TTACCCCGCG
CCGATCGTGC GCAACATCGA CGGTGGCCGC GAGCTGAAGA TGGCCCGTTG GGGCATGCCG
TCGTCGTCGA AGGCGCTGAT GGACGCCACC GCAAAGCGGG CGGCGAAGCT GGAGGCCAAG
GGCAAGCAGT TCGACTTCAA GGAGCTGCTG CGGATGGAGC CAGACAGCGG CACGACGAAC
ATCCGCAACA CGTCCAGCAA GCACTGGAAG CGGTGGCTGG GCGTCGAAAA CCGATGCATC
GTCCCGATGT CGTCGTTCAG CGAGTTCAAC AAGGAGGCCG GTGGGGACAT CTGGTTCGCG
TTGGACGAGA GCCGGCCGCT GGTCTGTTTC GCCGGCATGT GGACCAACTG GACGTCAGTC
CGGAAGGTCC GCGAAGGCGA GACCACGAAC GACATCTTCG CCTTCCTGAC CACCGAGCCA
AACGCCGAGG TAGGCGCCAT TCATCCGAAG GCGATGCCGG TGATCCTGAC GACGCCCGAG
GCGGTAGACG TCTGGCTGCG CGCCCCATGG GATGAGGCCA AGGCGCTGCA GCGGGCGCTT
CCGGACGGAG CGCTGCGGAT CGTCGCCCGA GGCGCAAAGA AAGACGGCGA CGGAGCCGAA
CCATGA
|
|---|
| Protein sequence | MCNLYSMTKN QAAIRNLFKV DTDSVGNLPS MPGIFPDYPA PIVRNIDGGR ELKMARWGMP
SSSKALMDAT AKRAAKLEAK GKQFDFKELL RMEPDSGTTN IRNTSSKHWK RWLGVENRCI
VPMSSFSEFN KEAGGDIWFA LDESRPLVCF AGMWTNWTSV RKVREGETTN DIFAFLTTEP
NAEVGAIHPK AMPVILTTPE AVDVWLRAPW DEAKALQRAL PDGALRIVAR GAKKDGDGAE
P
|
|---|
| |