Gene RPD_3602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3602 
Symbol 
ID4024116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4013020 
End bp4013802 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content70% 
IMG OID637963806 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_570726 
Protein GI91978067 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0475224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACA CGGACAGCAT GAGCACGCCG GTTCTCACCA TCGAGGGCCC GCGCGCCACC 
ATCCGGCTGA ACCGGCCGGA GCACCTCAAC CGGCTGCAGC CGGACGACCT CGAGGCGCTG
CTCGAGCATT TCGCGCAGAT CGAGAGCGAC GCCTCGGTGC GCGTGCTGGT CCTGACCGGC
ACCGGCCGGG CGTTTTCGGC GGGCTTCGAC CTCGGCAAGG TCGCGGAGCG CGCGGCCAGC
GAGGTCGAGG GTGAGTCCTC GGGCGCGGCC TTCGAAGTCG TCGCCGACCG GCTCGAGGAT
TTGCGGGTGC CGACGATCTG CCGGCTGAAC GGCGGCGTCT ATGGCGGGTC GACCGATCTG
GCGCTGGCCT GCGATTTCCG CATCGGCGTC GACACCGCCG AGATGTTCAT GCCGGCGGCG
CGGCTCGGGC TGCATTACTA CCCGTCGGGC ATCAAGCGTT ACGTGACGCG GCTCGGCGTC
AACAACGCCA AGACGCTGTT CCTGACCGGG CAGCGGCTCG ACGCCGCCGC GATGCTGCGG
ATCGGTTATT TGACCGCGAT GGTGCCGATG GAACGGCTCG ACCGCGAGGT CGACGCGCTG
GCCGCGACCC TCGCCGGCAA CGCGCCGAAT GCGGTGGCCG GCATGAAGCG CGCCATCAAC
GAGTTCGCCC GCCAGGCCCT CGACGAGCCG GCCGCCGACG CTCGCGCCCG CGCCTCGATG
CGCGGCGCTG AAATCAAGGA AGGCATCGCC GCCTTCGCGG AGAAACGCAC GCCGAAGTTT
TGA
 
Protein sequence
MSDTDSMSTP VLTIEGPRAT IRLNRPEHLN RLQPDDLEAL LEHFAQIESD ASVRVLVLTG 
TGRAFSAGFD LGKVAERAAS EVEGESSGAA FEVVADRLED LRVPTICRLN GGVYGGSTDL
ALACDFRIGV DTAEMFMPAA RLGLHYYPSG IKRYVTRLGV NNAKTLFLTG QRLDAAAMLR
IGYLTAMVPM ERLDREVDAL AATLAGNAPN AVAGMKRAIN EFARQALDEP AADARARASM
RGAEIKEGIA AFAEKRTPKF