| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3574 |
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| Symbol | |
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| ID | 4024088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3979758 |
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| End bp | 3981014 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637963778 |
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| Product | amine oxidase |
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| Protein accession | YP_570698 |
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| Protein GI | 91978039 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3349] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03467] squalene-associated FAD-dependent desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.119107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACAA CAGTTCACGT CATCGGCGCC GGGATCTCCG GCCTTGCGGC CGCGATCAAG
CTCTCCCGCC AGGGCTTCGT CGTGCACGTC CACGAGGCGA TGCAGCAGGC CGGCGGGCGC
TGCCGCTCCT ATTTCGACGC GCAGACCAAC CTCGTGATCG ACAACGGCAA TCATCTGCTG
CTGTCGGGCA ACCAGGCCGC GCTCGACTAT GCGCGCGCGA TCGGCACCGA GGCCGGGCTG
GTCGGGCCGG AGCGCGCCGA ATTCGACTTC ATGGACCTGA AATCGAACGC GCGCTGGCGG
ATCAACCTCG GCAGCGGCCG GCTGCCGCTG TGGGTGCTCG ACGCCAACAG CCGGGTGCCC
GACACCAGCC TGCGCGACTA TCTGGCGCTG ATGCCGCTGC TGTGGGCGCC GACAAGCAAA
CTGATCGGCG ACACCATTCC GTGCAATGGC CCGCTGTACG ACCGGCTGGT GCGGCCGTTG
CTGCTCGCTG CCCTCAACGT CGAACCGGCG GAGGGCTCTG CGGGGCTCGC CGGCGCGGTG
GTGCGGGAAA CCCTGCTGGC CGGCGGCAAG GCGTGCCGCC CGCTGATCGC CCGCGACGGC
CTCAGCGCGG TGCTGGTCGA GCCGGCCGTC GAGCTGTTGA AGCGCAGCGG CCCGGGCGTG
CAGTTCGGCC ACGAGCTGCG GTCGCTGACG CACGCCGGCG ATCGCGTCGG CGGTCTGAAT
TTCGGCGGCG AGGATGTGGT CGCGGTCGGC CCCGATGACG TCGTGGTGCT GGCCGTGCCG
CCGCGGCCGG CGGCTGCGCT GCTGCCCGGC CTGAAGGCGC CGCAAAATTA CCGGGCGATC
GTCAACGCCC ATTTCAATTA CGCGCCGCCG GCCGGGATGC CGGCGCTGAC GGGCGTCATC
GGCGGCGAGG TGGAATGGCT GTTCGCCTTC CCGAACCGGC TCTCGGTGAC CATCAGCAAT
GGCGACCGGC TGGTCGATGC CCCGCGCGAC CAGCTTGCGG CCGCGATCTG GGCCGAAATC
TGCCAAGTCG CGGGGATTAG GGCAAATTTG CCGCCGTGGC AAATTGTCCG CGAGCGTCGG
GCAACCTTCG AGGCTACACC GGCGCAGAAC GCCCTGCGTC CTGGGCCGGT CACCCAGTGG
AAAAACCTAT TCCTCGCGGG TGATTGGACT GATACGGGGT TGCCCGCCAC CATCGAGGGG
TCGGTCCGGT CAGGAAGCCG GGCTGCGGAC TTGGTACTGG CGCTGAGTCA GGCCTGA
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| Protein sequence | MPTTVHVIGA GISGLAAAIK LSRQGFVVHV HEAMQQAGGR CRSYFDAQTN LVIDNGNHLL
LSGNQAALDY ARAIGTEAGL VGPERAEFDF MDLKSNARWR INLGSGRLPL WVLDANSRVP
DTSLRDYLAL MPLLWAPTSK LIGDTIPCNG PLYDRLVRPL LLAALNVEPA EGSAGLAGAV
VRETLLAGGK ACRPLIARDG LSAVLVEPAV ELLKRSGPGV QFGHELRSLT HAGDRVGGLN
FGGEDVVAVG PDDVVVLAVP PRPAAALLPG LKAPQNYRAI VNAHFNYAPP AGMPALTGVI
GGEVEWLFAF PNRLSVTISN GDRLVDAPRD QLAAAIWAEI CQVAGIRANL PPWQIVRERR
ATFEATPAQN ALRPGPVTQW KNLFLAGDWT DTGLPATIEG SVRSGSRAAD LVLALSQA
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