Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3540 |
Symbol | |
ID | 4024054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3931375 |
End bp | 3932262 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637963744 |
Product | 5,10-methylenetetrahydrofolate reductase |
Protein accession | YP_570664 |
Protein GI | 91978005 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.701221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGACG TGCTGCAGCA CATTCCGGCG ATCTCCTTCG AGTTCTTTCC GCCGAAGACC GACGAGATGG AGCGCACTCT GTGGCAGGCG ATCAGCCGGC TCGCGCCGCT GACGCCACGC TTCGTCTCGG TCACCTACGG CGCCGGCGGC TCGACCCGCG AGCGCACCCA CTCCACCATC GCCCGCATCC TGCGCGAAAC CCATCTCACG CCGGCGGCCC ACCTCACCTG CGTCGATGCG CCTTGCGCGG ATGTCGACGA GGTGGTGGAG CGCTACTACG ACATCGGCGT TCGCCACATC GTCGCATTGC GCGGCGATCC GTCGAGCGGA CTCGGCGGCG CCTACACGCC GCATCCGCAG GGCTATCGCA GCTCCGCCGA TCTGGTCGCC TCGATCAAGC GCCGGCATCC CGATATCGAG GTGACGGTGT CGGCCTATCC CGAGAAACAT CCGGAAAGCA CCGGCTTCGA CGCCGACCTC GACATGCTGC AAGCCAAGGT CGATGCCGGC GCGACCCGCG CCATCACCCA GTTTTTCTTC GACAACGATC TGTACTTCCG CTACCTCGAT CGCGTCCGCG CCCGGGGCAT CGACATTCCG ATCGTGCCCG GCATCCTGCC GGTGCAGAAC TTCAAGCAGG CCTCGAACTT CGCCACGCGC GCCGGCGCCA GCGTGCCGGA CTGGCTGGCA AAGCAGTTCG AAGGGCTCGA CGACGATCCC GACACCCGAA AGCTGGTGGC GGCGACGGTC GCCGCCGGCC AGGTTCACAA GCTCGCCAAA CACGGCGTCG ACACCTTCCA CTTCTACACG ATGAACCGCG CGGACCTGGT GTTCGCGATC AGCCATCTGC TCGGCCTTCG GCCGCAGGCC GCACAGAAAG CCGCGTGA
|
Protein sequence | MSDVLQHIPA ISFEFFPPKT DEMERTLWQA ISRLAPLTPR FVSVTYGAGG STRERTHSTI ARILRETHLT PAAHLTCVDA PCADVDEVVE RYYDIGVRHI VALRGDPSSG LGGAYTPHPQ GYRSSADLVA SIKRRHPDIE VTVSAYPEKH PESTGFDADL DMLQAKVDAG ATRAITQFFF DNDLYFRYLD RVRARGIDIP IVPGILPVQN FKQASNFATR AGASVPDWLA KQFEGLDDDP DTRKLVAATV AAGQVHKLAK HGVDTFHFYT MNRADLVFAI SHLLGLRPQA AQKAA
|
| |