Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3465 |
Symbol | |
ID | 4023979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3845220 |
End bp | 3846149 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637963669 |
Product | senescence marker protein-30 (SMP-30) |
Protein accession | YP_570589 |
Protein GI | 91977930 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.391955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAACA TTCGCGTTCT CGCAACCGAT CTGGCATTTC CCGAAGGTCC GGTGGTGATG CCCGACGGCT CGGTGGTGCT GGTCGAAATC CGCGCCCAGC AGCTCACGCG AATCTGGCCG GACGGCCGCA AGGAAGTCGT CGCCAAGGTG CCGGGCGGAC CCAACGGCGC GGCGCTCGGC CCCGACGGCA AGATGTACAT CTGCAACAAT GGCGGCTTCG GCTGGTTTCC GTCGCGCGGG ACGATGATGC CCGGCGCGCC GGAGCCCCAC GAATATATCG GTGGTTCGAT CCAGCGGATC GACCTGACCA GCGGCAAAGT CGAGACGCTG TTCGACAAAT GCGGCGAGCA CCCGCTGAAA GGCCCGAACG ATCTGGTGTT CGATAGGCAC GGCGGCCTGT GGTTCACCGA CCTCGGCAAG CGCCGCGCCC GCGATTTGGA TGTCGGCGCC GCCTATTACA TCAAGCCAGG CATGAAAGAG ATCAGCGAGC AGGTGTTCGG CACGCTGCCG CTGAACGGCA TCGGCCTGTC GCCGGACGAG ACCACAATGT ATGCCGCCGA GACGCCGACG GCGCGGTTGT GGGCCTACGA CATCGTCGCG CCCGGCGAGA TCAAGCCGCG CGATGTGATC TATCGCGGCG AGAAGGGCAA GCCGATTGCC GGCCTCGGCG GCTATCAGAT GTTCGACTCG CTCGCGGTCG AGGCGGGCGG CAATGTGTGC GTCGCGACGC TGGTGTCGGG CTGCATTTCG GTGATCGCGC CGGATGGTTT GCTGGTCGAG CAGGTGCCGA CCGGCGACCG CGTCACCACC AACATCGCGT TCGGCGGCCC TGAGCTGAAG ACCGCCTACA TCACCTTGTC CGGCAAGGGC GAGTTGATCG CGATGGACTG GCCGCGGCCC GGCCTGCCGC TGAACTTCCT GAACAAATAG
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Protein sequence | MSNIRVLATD LAFPEGPVVM PDGSVVLVEI RAQQLTRIWP DGRKEVVAKV PGGPNGAALG PDGKMYICNN GGFGWFPSRG TMMPGAPEPH EYIGGSIQRI DLTSGKVETL FDKCGEHPLK GPNDLVFDRH GGLWFTDLGK RRARDLDVGA AYYIKPGMKE ISEQVFGTLP LNGIGLSPDE TTMYAAETPT ARLWAYDIVA PGEIKPRDVI YRGEKGKPIA GLGGYQMFDS LAVEAGGNVC VATLVSGCIS VIAPDGLLVE QVPTGDRVTT NIAFGGPELK TAYITLSGKG ELIAMDWPRP GLPLNFLNK
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