Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3373 |
Symbol | |
ID | 4023885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3741993 |
End bp | 3742805 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637963578 |
Product | ErfK/YbiS/YcfS/YnhG |
Protein accession | YP_570498 |
Protein GI | 91977839 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.5042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00517308 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAAGTCGA AGGATCGGGC CGAGGAGGCC GGCATCATGC GTTCGTATCT CGTTTCCCTC ACCGGTCTGA TCCTGCTGGC GGCGTCCACT GCTCAGGCAA AAGTCGCGAT CACCGTCGAC AAGGACAATC AGGAAATGAC CGTCGCGGTC GATGGCGTCG AACGCTATCG CTGGCCGGTC TCGACCGGCA ATCCGTCGCA CGAGACGCCG AACGGATCAT TCCGCACCTT CCGGATGGAA GCCGATCACT ACTCGAAGGA GTTCGACGAT GCGCCGATGC CGCACGCGAT CTTTTTCACC CGTCAGGGCC ACGCGATCCA CGGCACCGAC GCCGCAGGGA AGCTCGGCGT GCCGGTGTCG CATGGATGCA TCAGGCTGTC GCGCGACAAC GCCTCCACGC TCTATGCGCT GGTCGAGAAA GACGGCGTTC TCAATACAAC CGTGAACCTC ACCGGATCGT CGCGGGTGGC TTTGGCGAAG CAACCCGGCA ACAAGGCGAA CACCGCGGTG GCGCGCCGCG CTCCGGCGCC GAGCTATGAC GGCACCGGCG AACCCGTCGA ACTGGCGCCC CGCGCGCAGC CGCGGGTGGC CAGACCGCAA GTCGCCGAGG ACGGCTTCAT CTATCCGGCC GACGGCAATG ACGGCCGCCG TTATCCGGCG CCTCCCGGCT ATCGCCGCGG CTACGCCCAA CAGCAATATC AGCCGCAATA TCAGTATCAA TATTCCGAAG ATGACAGCTA CGCGGCGCAG GTCTACGCCC CTCGTCGCTT CTATCAACCG CGCGGCTATT CCGGCGGCTA CTCGGACGAC TGA
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Protein sequence | MKSKDRAEEA GIMRSYLVSL TGLILLAAST AQAKVAITVD KDNQEMTVAV DGVERYRWPV STGNPSHETP NGSFRTFRME ADHYSKEFDD APMPHAIFFT RQGHAIHGTD AAGKLGVPVS HGCIRLSRDN ASTLYALVEK DGVLNTTVNL TGSSRVALAK QPGNKANTAV ARRAPAPSYD GTGEPVELAP RAQPRVARPQ VAEDGFIYPA DGNDGRRYPA PPGYRRGYAQ QQYQPQYQYQ YSEDDSYAAQ VYAPRRFYQP RGYSGGYSDD
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