Gene RPD_3373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3373 
Symbol 
ID4023885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3741993 
End bp3742805 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content64% 
IMG OID637963578 
ProductErfK/YbiS/YcfS/YnhG 
Protein accessionYP_570498 
Protein GI91977839 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.5042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00517308 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAGTCGA AGGATCGGGC CGAGGAGGCC GGCATCATGC GTTCGTATCT CGTTTCCCTC 
ACCGGTCTGA TCCTGCTGGC GGCGTCCACT GCTCAGGCAA AAGTCGCGAT CACCGTCGAC
AAGGACAATC AGGAAATGAC CGTCGCGGTC GATGGCGTCG AACGCTATCG CTGGCCGGTC
TCGACCGGCA ATCCGTCGCA CGAGACGCCG AACGGATCAT TCCGCACCTT CCGGATGGAA
GCCGATCACT ACTCGAAGGA GTTCGACGAT GCGCCGATGC CGCACGCGAT CTTTTTCACC
CGTCAGGGCC ACGCGATCCA CGGCACCGAC GCCGCAGGGA AGCTCGGCGT GCCGGTGTCG
CATGGATGCA TCAGGCTGTC GCGCGACAAC GCCTCCACGC TCTATGCGCT GGTCGAGAAA
GACGGCGTTC TCAATACAAC CGTGAACCTC ACCGGATCGT CGCGGGTGGC TTTGGCGAAG
CAACCCGGCA ACAAGGCGAA CACCGCGGTG GCGCGCCGCG CTCCGGCGCC GAGCTATGAC
GGCACCGGCG AACCCGTCGA ACTGGCGCCC CGCGCGCAGC CGCGGGTGGC CAGACCGCAA
GTCGCCGAGG ACGGCTTCAT CTATCCGGCC GACGGCAATG ACGGCCGCCG TTATCCGGCG
CCTCCCGGCT ATCGCCGCGG CTACGCCCAA CAGCAATATC AGCCGCAATA TCAGTATCAA
TATTCCGAAG ATGACAGCTA CGCGGCGCAG GTCTACGCCC CTCGTCGCTT CTATCAACCG
CGCGGCTATT CCGGCGGCTA CTCGGACGAC TGA
 
Protein sequence
MKSKDRAEEA GIMRSYLVSL TGLILLAAST AQAKVAITVD KDNQEMTVAV DGVERYRWPV 
STGNPSHETP NGSFRTFRME ADHYSKEFDD APMPHAIFFT RQGHAIHGTD AAGKLGVPVS
HGCIRLSRDN ASTLYALVEK DGVLNTTVNL TGSSRVALAK QPGNKANTAV ARRAPAPSYD
GTGEPVELAP RAQPRVARPQ VAEDGFIYPA DGNDGRRYPA PPGYRRGYAQ QQYQPQYQYQ
YSEDDSYAAQ VYAPRRFYQP RGYSGGYSDD