Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3365 |
Symbol | |
ID | 4023877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3732652 |
End bp | 3733191 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637963570 |
Product | thioesterase-like |
Protein accession | YP_570490 |
Protein GI | 91977831 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.736956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00851583 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGATCGAG ACCGCAACGC GGCTTCAGAC ACGACGATTG TTGCGGCGCC CGCGCCGTTT GTTTCATCGG TGATGCAGAT CGAACCGGGA TGGATCGACT ATAACGGCCA TCTCAACATG GCCTATTACA ACGTGCTGTT CGACCGTGCG GTCGATCAGC TGTGGCTCGA ACTAGGTATC GGTGCGGACT ATCTGAGCGA GCGCGGCGGC TCGACCTTTA CCGCGGAATG CCACGTCCGT TATTTGCGGG AAATCCATCT CGGCGACCCC GTAAAAGTCG CGGTGTACAT CATCGCCGCC GACGAGAAGC GAATTCACAC CTTCGAGGAG CTGCGCCACG CCGAGGACGG CTGGCTGTCC GCAACCTCGG AGAATATGTC GATGCATGTC GACATGGGAT CGCGGAAGGT CGCGCCATTT CCGCCTGACA TCCGCGCCCG GATCGAGCGG GTGGCCGAAG CGCATCGCGC GTCGCCGCGG CCGGAGGGCA TCGGACGTCA CATCGCGATG CCCTCGAAGC GTGCGGCCAC GGCGCGCTAG
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Protein sequence | MDRDRNAASD TTIVAAPAPF VSSVMQIEPG WIDYNGHLNM AYYNVLFDRA VDQLWLELGI GADYLSERGG STFTAECHVR YLREIHLGDP VKVAVYIIAA DEKRIHTFEE LRHAEDGWLS ATSENMSMHV DMGSRKVAPF PPDIRARIER VAEAHRASPR PEGIGRHIAM PSKRAATAR
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