Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3356 |
Symbol | |
ID | 4023867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3720206 |
End bp | 3721192 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637963561 |
Product | hypothetical protein |
Protein accession | YP_570481 |
Protein GI | 91977822 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.135205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00401595 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAATGGT TTGCTCGATT GCTGAGGCTC GGCGGCTTCG CGTGTGCGGC CGGCGCCCTT CTCTCTACGC CCACGCTCGC AGCGGACTAT CCGGTACGCA CGATCACCAT GATCGTGCCT TTCGCAGCCG GCGGCCCGAC CGACGTGATC GCGCGGATTG TCACCCAGCA CATGTCGGCC ACGCTCGGCC AGGCGATCGT GATCGAGAAC GTTGTCGGCG CCGGCGGCAC CACCGCGACG ACCCGTGCGG CGCGCGCCAC CCCGGACGGC TACACGCTTA TCACCGGGCA CATGGGCACG CACGCCGCCG CGGTTCCGCT GTATCCGAAG CTTGCCTATC ATCCGGAGAA GGATTTTGAG CCGGTATCGC TACTCGCCGG AACGCCGATC CTGATCCTGG CGCGGAGCGA TTTCCCGCCG AAGGACCTAA GTGAGTTCAT CAGCTATGTG AAGGCCAACA GCGAAAAGCT GAACCAGGCT CATGCGGGCG TCGGGTCGGT ATCTCACGTG TCCTGTCAGT TGCTGAATTC CGTGCTCGCC ATCAAGCCGA CCGGGGTGCC GTTCAACGGC ACCGGCCCGG CGATGAACGC ACTGGTCGGC AAGCAGGTCG ATTTCATGTG CGACCAGATC GTCAACGCTG TGCCCCAGAT CAAGGGCGGC ACGATCAAGG GGTATGCGAT CGCCACGCCT GCGCGCAATC CTTCCCTTCC GGAGGTTCTC ACAACGACCG AAGGCGGCCT CCCGGCTTTC AAAGCTCAGG CCTGGAACGC TATTTTCGCG CCAAAGGGAA CGCCGGCGCC GATCGTTGCA ACCCTCAACG CTGCGGTGAC GAAGGCGCTC GACGACGAGA GCGTCCGCAA GCGGCTGCTC GATCTCGGTA GCGTGATCCC GGAACCCGCG GAGCGGACGC CGGAGGCCTT GGGAAAGCTG GTGGAGTCCG AAATAGCCAA ATGGACCCCG GTTTTGCGGG ATGCCGCCGC GAATTGA
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Protein sequence | MKWFARLLRL GGFACAAGAL LSTPTLAADY PVRTITMIVP FAAGGPTDVI ARIVTQHMSA TLGQAIVIEN VVGAGGTTAT TRAARATPDG YTLITGHMGT HAAAVPLYPK LAYHPEKDFE PVSLLAGTPI LILARSDFPP KDLSEFISYV KANSEKLNQA HAGVGSVSHV SCQLLNSVLA IKPTGVPFNG TGPAMNALVG KQVDFMCDQI VNAVPQIKGG TIKGYAIATP ARNPSLPEVL TTTEGGLPAF KAQAWNAIFA PKGTPAPIVA TLNAAVTKAL DDESVRKRLL DLGSVIPEPA ERTPEALGKL VESEIAKWTP VLRDAAAN
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