Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3296 |
Symbol | |
ID | 4023806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3649002 |
End bp | 3650417 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637963500 |
Product | amidase |
Protein accession | YP_570421 |
Protein GI | 91977762 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.297102 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0238145 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGACG GCGTGATGAA CAAGGCCACC GCGCTACACG CGCTCTCCGC CACCGAGCTG CTCGCCGGCT ACTACGCCAA GCAGTTCTCG CCGCTCGACG TGATCGACGA TGTGATCGCC CAAATCGCGC GCTGGGAGCC GCACATCAAG GCGCTGTATG CGTTCGATCC CGACGGCGCC CGCGCCGTGG CGAAGGCCTC CACCGAACGC TGGCGCAACA GCGATCCGAT CGGCCCGCTC GACGGCGTGC CGGTGACGAT CAAGGAGAAC CTCGCGACGC AAGGCACGCC GGTGCCGCTC GGCGCGGCGA CGACCCGGCT CGCGCCGGCG CCGGCCGATG CGCCGCCTTC GGCGCGGCTG CGCGAAGCCG GTGCGGTGAT CTATTCCAAG ACCACGATGC CGGATTTCGG GATGCTGTCG TCGGGGCTGT CGAGCTTCCA CGGCATCACG CGCAATCCCT GGGATCTGAC GCAGAACACC GGCGGCTCGT CCTCGGGGGC CGGCGCGGCC GGCGCTGCGG GCTACGGGCC GCTGCATCTC GGCAGCGATA TCGGCGGCTC GGTGCGGCTG CCGGCGAACT GGTGCGGCCT GTTCGCGCTG AAGCCGTCGC TCGGCCGCGT GCCGATCGAT CCGCCTTATG TCGGCCGCTG CGCCGGGCCG ATGACCCGCA CCGTCGACGA CGCCGCGCTG ATGATGAGCG TGCTGTCGCA GCCCGATGCG CGTGACGGCA TGAGCCTGCC GCCGCACGAT TTCGCGTGGC ACGATCTGGC GATCGATCTG CGCGGAAAGA AACTCGGGCT CGTCACCGAT CTCGGCTTCG GGCTGGCGCT TGAAGACGAG GTGCGCGACG TCGTGGTGAA AGCCGCGCGC GCATTCGAGG CGCAAGGCGC GATCTTGCAG GAGGTTCAAC TCGGCTTCAC CCGCGCGATG ATGGACGGGC TCGACAATTT CTGGCGGGCG CGGCTCTGGG ACGATCTCGC ACAGCTCAGC GACGAACAGC GCAGTCAGGT GCTGCCTTAC ATCTATCGCT GGGCCGAGCG AGGCGCGCAG CTGACCGGCG TCGAGGTGAT GCGCGGCTTC AACATGACGA TGGCGGTCCG CGCGATCGGC GCGGAGCTGT TCGCGGATAT CGACTACCTG ATCTCGCCAG TCGCGCCGGT CGTCAGTTTT CCCGCCGAGC GCGCCTCGCC GCTCGACGAT CCCGACAAAC CGTTCGATCA CATCCTCTAT ACCGTGCCAT GGAATATGGC CGAGAACCCG GCCGCGTCGA TCAATGGCGG CTACAGCGCG AAGGGCTTTC CGATCGGCGT GCAGATCGTC GGACGCAGGT TCGACGATCT CGGCGTCCTC AAAATGGCAA AAGCGTTCGA AGGCCTGCGC GGCCGACAGC TTCCATGGCC CGAGCCGCCG CGCTGA
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Protein sequence | MSDGVMNKAT ALHALSATEL LAGYYAKQFS PLDVIDDVIA QIARWEPHIK ALYAFDPDGA RAVAKASTER WRNSDPIGPL DGVPVTIKEN LATQGTPVPL GAATTRLAPA PADAPPSARL REAGAVIYSK TTMPDFGMLS SGLSSFHGIT RNPWDLTQNT GGSSSGAGAA GAAGYGPLHL GSDIGGSVRL PANWCGLFAL KPSLGRVPID PPYVGRCAGP MTRTVDDAAL MMSVLSQPDA RDGMSLPPHD FAWHDLAIDL RGKKLGLVTD LGFGLALEDE VRDVVVKAAR AFEAQGAILQ EVQLGFTRAM MDGLDNFWRA RLWDDLAQLS DEQRSQVLPY IYRWAERGAQ LTGVEVMRGF NMTMAVRAIG AELFADIDYL ISPVAPVVSF PAERASPLDD PDKPFDHILY TVPWNMAENP AASINGGYSA KGFPIGVQIV GRRFDDLGVL KMAKAFEGLR GRQLPWPEPP R
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