| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3218 |
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| Symbol | |
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| ID | 4023725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3570643 |
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| End bp | 3572718 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637963420 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_570344 |
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| Protein GI | 91977685 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCATTCC TGACCACCCC CCCGCCGCTC GCCCGAGCTC TGGCGGAGCG CAATTATCTT
GAAGCAACGC CGGTGCAGAG CGCGGTGCTG GCGCCCGAAG CGGCCGGCCG CGATCTGCTG
GTGTCGGCGC AGACCGGCTC CGGCAAGACC GTCGCCTATG GGCTGGCGAT CGCCCGTGAC
CTGCTCGGCG ATTCCGAGCG GTTTTCATCC GCCGCCGCGC CTTTGGCGCT GATCGTGGCG
CCCACCCGCG AACTCGCGCT GCAGGTTCAT CGCGAACTCG GCTGGGTCTA TGGCTACGCC
GGGGCGCGCG TGGTGTCGTG CGTCGGCGGC ATGGACCCGC GCCGCGAGCA GCGCGAACTG
GCCGAGGGCG CGCATATCGT GGTCGGCACC CCGGGGCGGC TGTGCGACCA TCTGCGCCGC
AACCGGCTCG ACGTCTCGCA GCTGAAGGCC GTGGTGCTCG ACGAGGCCGA CGAGATGCTC
GATCTCGGCT TTCGCGAGGA TATGGAGTTC ATCCTCAAGA CCACGCCGGC CACCCGCCGC
ACGCTGCTGT TCTCCGCGAC GCTGCCGCGC GGCATCATCG CGCTGGCCAA GACCTATCAG
CACGACGCCT TCCGGATCGA GGTCGAAGGC CGCGAGGGTG GCCACGCCGA TATCGAATAT
CGCGCGATGC GGATCGCGCC GAGCGATGTC GAACACGCCG TGGTCAACAC CCTGCGCTTC
GTGGAATCGC CCTCCGCGAT CGTGTTCTGC AATACCCGCA ACGCGGTGAA CCATCTGCAG
ACGTCGCTGC TGGAGCGCGG ATTCTCCGTC GTGGCGCTGT CCGGCGAACT CACCCAGAAC
GAACGCACGC AAGCGCTCAA CTCCTTGCGC GACGGCCGCG CCAGGGTTTG CGTCGCCACC
GACGTCGCCG CGCGCGGCAT CGATCTGCCG AATCTCGGCC TCGTCATCCA TGCCGATCTG
CCCAACGATC CGGAAGTGAT GCAGCATCGC TCGGGGCGCA CCGGGCGCGC CGGCAAGAAG
GGCGTCAGTG TCCTGCTGGT GCCGCCGGCA CGGCGGCGAC GCGCCGAACT GCTGCTCAAT
CTCGCCGGCA TCGAAGCGAT CTGGGGCACC GCGCCGCAGG CCGACGAAAT CCGCGTCCTC
GATCAGCAAC GCATGACGCA GGACACTCTG TTCACCGACG AGATCTCGCC CGAGGATCAG
GCGCTGGCTC AGGTGCTGCT GGCCGAGCGT ACGGCCGAGG AGATCGCGAT CGCGTTGGCG
CGGCTGTATC GAGCGCGGCT GCCTTCGCCG GAAGACATTC TCGATCCCGG CCAGGCCAAT
GCCCGCGGCC GCGACGATCG TGCATCCCCC AAGGGCGCAC GCGCGCCGCG CGAGGAGCGC
GACTACGGTC CGCGTGACTC CGGTCCACGG GCGCGCTCGG CCAAAGCGGG GCAAAAGCAC
GCCATGACCG ATGGCGTCTG GTTCCGTGCG GCGATCGGCA AGCGCAAGAA CGCCGAGGCG
CGCTGGCTGT TGCCGATGAT CTGCCGCCGC GGCGGCATCG ACCGCCAGGC GATCGGCGCG
ATCCGCATTC TCGACACCAC CACCGAGTTC GAGATCGCGG CATTCGCCGC GGAAGATTTC
GCGGCGCAGA TCAAGCGCCC GGACAAGGAC GACAATATCC GGATCGAGCC GCTGATCGGC
GCCAAGCCGA TCGAGCCGGC CGCCGACAAG CCCGCTTACA AGCCGCATGA CGGCAAGAAG
TCCGAACGCG AGACGCGCCG CAGCAAGCGG CCCGATCCGT GGACTCCGTT GTCGGGCAAG
GCGGATGGCG AAGCGCGGCG GGAGACCGGG ACTGCCGACA CCTCTCACGG CGCGCCACGC
GGCAAGAGCT TCGACGATCA GCGGACGCCG CGCGCCGCCA AGGATGCAGG GGTCAAAGAA
AGCGGCTTCA AGAAAGAGGG CTTCAAGAAG GACGGGTTCA AGAAGCCGAA GTCGCGCGAC
GACAAGCCGG CCTATGTCAG CAAGGCGCGC CGCGCCGATC CGTCTGCCCC GAGCCCCGGT
TTCAAGAAGA AAGCCAAGAA GAAGTTTCGC GACTGA
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| Protein sequence | MPFLTTPPPL ARALAERNYL EATPVQSAVL APEAAGRDLL VSAQTGSGKT VAYGLAIARD
LLGDSERFSS AAAPLALIVA PTRELALQVH RELGWVYGYA GARVVSCVGG MDPRREQREL
AEGAHIVVGT PGRLCDHLRR NRLDVSQLKA VVLDEADEML DLGFREDMEF ILKTTPATRR
TLLFSATLPR GIIALAKTYQ HDAFRIEVEG REGGHADIEY RAMRIAPSDV EHAVVNTLRF
VESPSAIVFC NTRNAVNHLQ TSLLERGFSV VALSGELTQN ERTQALNSLR DGRARVCVAT
DVAARGIDLP NLGLVIHADL PNDPEVMQHR SGRTGRAGKK GVSVLLVPPA RRRRAELLLN
LAGIEAIWGT APQADEIRVL DQQRMTQDTL FTDEISPEDQ ALAQVLLAER TAEEIAIALA
RLYRARLPSP EDILDPGQAN ARGRDDRASP KGARAPREER DYGPRDSGPR ARSAKAGQKH
AMTDGVWFRA AIGKRKNAEA RWLLPMICRR GGIDRQAIGA IRILDTTTEF EIAAFAAEDF
AAQIKRPDKD DNIRIEPLIG AKPIEPAADK PAYKPHDGKK SERETRRSKR PDPWTPLSGK
ADGEARRETG TADTSHGAPR GKSFDDQRTP RAAKDAGVKE SGFKKEGFKK DGFKKPKSRD
DKPAYVSKAR RADPSAPSPG FKKKAKKKFR D
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