Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3142 |
Symbol | |
ID | 4023647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3496702 |
End bp | 3497049 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637963343 |
Product | helix-turn-helix, HxlR type |
Protein accession | YP_570269 |
Protein GI | 91977610 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.933421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.746954 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCCGG ATTCCGAAAG CGCTGTTCTC GACACGCCGT CGCCGCGTCA CCCGACAGAG TGTCCAGTCG AGGATTGGCT GTCGTTCCTC GGCCATCGGT GGAACGCGCT GATTCTCTGG CACCTTTCGA CAGGCGCGAA ACGTTTCTCC GAGATCATGG CGCTGTTGCC CGGCATCACG CCCAAGGTGA TGACCGACAG ATTGGAGCTG CTGGTCGAGC GAGACCTCGT CTCCCGCTCG TCACAGAATA CATTCCCGCG CGTGACCGCC TACCAGCTGA CAGAATCCGG CATCGCCATC GTGAGTATCC TCGACCAGAT CGAGCGGTGG GCGAAGAGAG ACAAGTAG
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Protein sequence | MYPDSESAVL DTPSPRHPTE CPVEDWLSFL GHRWNALILW HLSTGAKRFS EIMALLPGIT PKVMTDRLEL LVERDLVSRS SQNTFPRVTA YQLTESGIAI VSILDQIERW AKRDK
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