Gene RPD_3061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3061 
Symbol 
ID4023564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3409513 
End bp3410340 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content62% 
IMG OID637963260 
Producthypothetical protein 
Protein accessionYP_570188 
Protein GI91977529 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCG GAATCTCCGT TCTGCTGGCG CTCGGCCTCG TCTCGGCGGT TGCTTACTTC 
ACCGCCTCGA AGTGGGCGAT CCGTCACGAG ACGCTCACGT TCTTCGACAC TGTGCGCAAT
CGGCCAGTGG CTGTCGATAT CGCGGTCCGA CGCGACCGGG AAATGCAGGC CGACGCCGGG
TTGATCGAAC TGCCGGTGGC CATTCTCAAT CACGGCAACA CCGTTCGTTT CACCGAGTAC
TCGTTCCTCG CCAATCTGTT CGCGGCGCGT GGCTACATGG CCGTCAGCAT TCAGCACGAT
CTGGAGACCG ACGCTCCGCT GGCGACCAAG GTCGGCGAAC CCTATGTCGG TCGCCTCCCG
GTGTATCAGC GCGGCATCGC CAATATCGAA TTCGCGATGG AGAAACTCCG GGATCATCAG
CCGAATGCGG ATTACGACCA TCTGACGATG GTCGGACACT CCAATGGCGG CGACATTTCG
ATGTACTACG CGAAACTACA TCCCGAGCGG ATCAGGAAGG TGGTGACGCT GGACAACCTC
CGGGTGCCGT TCATGATCGA CGGCAGGTTC AGGATTCTGT CGTTCCGCTC CCAGGATCCG
GCTTTCAAGC CCGACCCCGG CGTCGTGCCC GATCAGGAGG TTTGCGACAA GGCGGGCATC
CTGGTGGTCA ACACCGGCTT TCATCACGTC GAGATGAGCG ATCGCGGCCC GGATGACGTC
AAGGCGTCGA TCAGCAGCAC GGTCGATCAG TTCCTCGCCA GCGAAGCCGT CGGTTCGGTG
ACGCCGCGGC CGCGGCCGGT GTCGGGTGCG ATCGCGCAGG TGAAATAG
 
Protein sequence
MTRGISVLLA LGLVSAVAYF TASKWAIRHE TLTFFDTVRN RPVAVDIAVR RDREMQADAG 
LIELPVAILN HGNTVRFTEY SFLANLFAAR GYMAVSIQHD LETDAPLATK VGEPYVGRLP
VYQRGIANIE FAMEKLRDHQ PNADYDHLTM VGHSNGGDIS MYYAKLHPER IRKVVTLDNL
RVPFMIDGRF RILSFRSQDP AFKPDPGVVP DQEVCDKAGI LVVNTGFHHV EMSDRGPDDV
KASISSTVDQ FLASEAVGSV TPRPRPVSGA IAQVK