Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3009 |
Symbol | |
ID | 4023512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3353846 |
End bp | 3354430 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637963208 |
Product | NnrU |
Protein accession | YP_570136 |
Protein GI | 91977477 |
COG category | [S] Function unknown |
COG ID | [COG4094] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.779568 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.383116 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACTTG CGATGATGAT CTTCGGCTTG GTGCTGTTCA TCGGCACCCA TGTCGTGACG ACGCGGCGCG ACCTGCGGGC CCGGCTGATC GGGATCGGCG GTGAAGCCGT CTACAAGATC GGTTACGCTG TTCTGGCGAT CGCGGGTATC GTCCTGATCG CCTATGGCTT CGGCGCCTAT CGCGCCGACG GATTGATCGA CCTTTGGCAT CCCCCGAAAT GGACCACGCA CCTCGCGGCG CTGCTGATGT TGCCGGTGGC GATCCTGCTG GCTGCCGCCT ATTCACGCGG CCGGATCTAT CGTGCGGTGA AGCACCCGAT GATCACCGCA GTGAAGCTGT GGGCCGTCGC GCATCTGATC GCCAACGGTG ATCTCGGCTC GATCATCCTG TTCGGCTCGT TGCTGGCCTG GGCAGTCTAT GATCGGATCT CGCTGAAGCA TCGCGCCGAT CCGGGCGGCC CGCCGATCCC GGTCGGCGGT CCGAAGAACG ACGCCATCGC GGTCGTGGTC GGCATCGTCC TTTATCTGGC GCTCGCCTTC GCTTTCCATC CGCTCGTCGT CGGCGTCCCT GTGTTCGGAG CCTGA
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Protein sequence | MGLAMMIFGL VLFIGTHVVT TRRDLRARLI GIGGEAVYKI GYAVLAIAGI VLIAYGFGAY RADGLIDLWH PPKWTTHLAA LLMLPVAILL AAAYSRGRIY RAVKHPMITA VKLWAVAHLI ANGDLGSIIL FGSLLAWAVY DRISLKHRAD PGGPPIPVGG PKNDAIAVVV GIVLYLALAF AFHPLVVGVP VFGA
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