Gene RPD_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3005 
SymbolengA 
ID4023508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3350153 
End bp3351535 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content65% 
IMG OID637963204 
ProductGTP-binding protein EngA 
Protein accessionYP_570132 
Protein GI91977473 
COG category[R] General function prediction only 
COG ID[COG1160] Predicted GTPases 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03594] ribosome-associated GTPase EngA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.428179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTCA CATTCGCTAT TATCGGTCGA CCCAATGTCG GCAAATCGAC GCTGTTCAAT 
CGCCTGGTCG GGCAAAAGCT CGCGCTGGTC GATGACACGC CTGGCGTCAC CCGCGATCGC
CGCGAAGGCG AGGGGCGCCT CGGCGATCTG GAATTCACCA TCATCGATAC TGCGGGGCTC
GACGAGGGCG CCAAGGGCTC GTTGACGGCG CGGATGCAGC AGCAGACCGA AACCGCGATC
GAACTCGCGG ACGCTCTGAT GTTCGTCTTC GACGCCCGCG CCGGGCTGAC CCCGAACGAT
CGCGCCTTCG CCGATTTCGC CCGCCGCGCC AATAAGCCGG TCGTCCTTGT CGCCAACAAG
AGCGAGGGCA AAGCCGGCGA GATCGGCGCG ATGGAATCCT ATGCGCTCGG TCTGGGCGAT
CCGGTGCAGA TTTCCGCCGA ACATGGCGAG GGACTGAGCG AACTGTACGA TGCGCTGCGC
GCGTTGATGC CGGAACCGGA CGTCGAACTC GAGGATGACG AGGAGATCGA CGGCCTCACC
GAGGAGGATT TCTCCAAGCG TCCGATCCGC GTCGCGATCG TCGGCCGGCC GAATGCCGGC
AAGTCGACCT TCATCAATCG CCTGCTCGGT GAGGATCGGC TGCTGACCAG CCCCGAGGCC
GGCACCACGC GCGACTCGAT TGCCGTCGAG GTGAATTGGA AGGGCCGCGA CTTCCGGATT
TTCGATACCG CGGGGCTGCG GCGTCGGTCG CGGATCGAGG AGAAGCTCGA GAAGCTGTCG
GTCGCCGACG CGTTGCGCGC GGTGCGCTTC GCCGAAGTGG TCGTGCTGAT GATGGATTCG
CAGAACCGCT TCGAGGAGCA GGATCTGCGC ATCGCCGATC TGATCGAGCG CGAAGGGCGG
GCGCTGGTGA TCGCGGTCAA CAAATGGGAT CTCGTCGAGC GGCAGGGCGG GCAGATCGCC
CAGCTTCGCA CCGACGCCGA TCATTGGCTG CCGCAGATCA AGGGTGTGCC GATCGTCGCC
ACCTCCGGCA TGCTCGGCGA GGGCGTCGAC CGGATGATGG AGGCGATCCA GGACGCCTAT
GCGGTGTGGA ATACGCGCGT GCCGACCGCC GCGCTCAACC GCTGGTTCGA GCAGGCGGTT
GCGCAGAACC CGCCGCCGGC GGTCGCCGGC CGCCGGTTGA AGCTGAACTA CGTGACCCAG
ACCAAGGCGC GGCCGCCCAG CTTCGTGGTG TTCTGCTCGC GGGCTGACGC CGTGCCGCAG
TCGTATCTGC GCTATCTGGT CAACAGCCTG CGTGGCGTGT TCGAGTTGCC GGGCACCCCG
GTCCGCATCA TGTTGCGCGA GAAGGCCAAT CCCTTCGCAC ACAAGCGCAA GAGAAAGTCA
TGA
 
Protein sequence
MSFTFAIIGR PNVGKSTLFN RLVGQKLALV DDTPGVTRDR REGEGRLGDL EFTIIDTAGL 
DEGAKGSLTA RMQQQTETAI ELADALMFVF DARAGLTPND RAFADFARRA NKPVVLVANK
SEGKAGEIGA MESYALGLGD PVQISAEHGE GLSELYDALR ALMPEPDVEL EDDEEIDGLT
EEDFSKRPIR VAIVGRPNAG KSTFINRLLG EDRLLTSPEA GTTRDSIAVE VNWKGRDFRI
FDTAGLRRRS RIEEKLEKLS VADALRAVRF AEVVVLMMDS QNRFEEQDLR IADLIEREGR
ALVIAVNKWD LVERQGGQIA QLRTDADHWL PQIKGVPIVA TSGMLGEGVD RMMEAIQDAY
AVWNTRVPTA ALNRWFEQAV AQNPPPAVAG RRLKLNYVTQ TKARPPSFVV FCSRADAVPQ
SYLRYLVNSL RGVFELPGTP VRIMLREKAN PFAHKRKRKS