| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2998 |
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| Symbol | |
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| ID | 4023501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3339430 |
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| End bp | 3340173 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963197 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_570125 |
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| Protein GI | 91977466 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.264049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.384966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAC CCCTCGCCTC CCGCATCGCT CTCGTCACCG GCGCTTCGCG CGGAATCGGC
TATGCGACCG CGCGCGCCTT GGCCAAGGCC GGCGCGCATG TGATCGCCGT CGCCAAGACA
CAAGGCGGAC TCGAGGAGCT CGACGACGCG GTGCGCAATG ATGGCGGCCA CGCCATTACG
CTGGTGCCGG TGGATCTCAC CGATTTCGAG GCGATCGCCC GCCTCGGCGC CTCGATCCAC
GAGCGCCACG GCAAGCTCGA CGTGCTGGTC GGCAATGCCG GCATCGCCGG TCCGTCGTCG
CCGCTCGGCC ATATCGAGAT GAAGTCCTGG ACCGGCGTGA TCGGTCTGAA CCTCACCGCC
AACTTCCAGC TGATCCGCTG CATGGAGCCG CTGCTGCGGA TGTCCGATGC CGGACGCGCC
GTGTTCCTCA CCTCGCGTGC CGGCGGCAAG GCCCCGGCCT ATCGCGGTCC CTACGCGGCG
TCGAAGGCGG CGCTTGATAC TTTAGTTCAA GTCTGGGCCA AGGAAGTCGT CAATACGACG
CCGATCCGCG TCAACCTGTT CGATCCCGGC CCGACCCGTA CCAAGCTGCG CGGCACCATC
ATGCCCGGCG AAGACCCGGA AACGCTACAG ACTCCGGATC AGGTCGCGGA ATTACTGGTA
CCGCTGTGCC TGCCATCCTG GACGGAGACC GGCAAGCTGT TCGACGGCGC ATCCCGGACC
GTGAAAGACC CCTCCGCCGA TTGA
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| Protein sequence | MTQPLASRIA LVTGASRGIG YATARALAKA GAHVIAVAKT QGGLEELDDA VRNDGGHAIT
LVPVDLTDFE AIARLGASIH ERHGKLDVLV GNAGIAGPSS PLGHIEMKSW TGVIGLNLTA
NFQLIRCMEP LLRMSDAGRA VFLTSRAGGK APAYRGPYAA SKAALDTLVQ VWAKEVVNTT
PIRVNLFDPG PTRTKLRGTI MPGEDPETLQ TPDQVAELLV PLCLPSWTET GKLFDGASRT
VKDPSAD
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