| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2870 |
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| Symbol | |
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| ID | 4023368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3197330 |
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| End bp | 3199000 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963068 |
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| Product | beta-lactamase-like |
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| Protein accession | YP_569999 |
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| Protein GI | 91977340 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
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| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.820732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.485445 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGGC CGGACGAACT TACTTTTGCG CCCTTGGGCG GTGTCGGCGA AATTGGGATG
AATCTGTCGA TCTACGGGCT CGGCAACCGC CATCAGCGGA GCTGGCTCGC GGTCGATCTC
GGCGTGTCGT TCGGCGACGA GGAACACCTG CCCGGCATCG ATTTGATCAT GCCGGATGTC
CGTTTTCTCG AGAAGGAGAA GAAGAATCTG GTCGGGCTGG TGCTGACCCA CGCCCACGAA
GACCATTTCG GCGCCATCAT CGACCTGTGG CCGAAGCTGC GCTGCCCGAT CTATGCGACA
AAGTTCAGCG CGGCGCTGTT CGCCGCCAAG CTCGCGGCCG AGCGCACCAC GCTGAAGATC
CCGATCACCG AGGTGCCGTC CGGCGGTCGC ATCGATCTCG GGCCGTTCAA CATCGAGTTC
ATCCCGGTCG CGCATTCGAT TCCGGAATCG CACGCGCTGG CGATCCGCAC CTCGGCCGGC
CTTGTGCTGC ACACCGGCGA CTGGAAGATC GACCCGACCC CGGTGGTCGG CCCGCCCACC
GACGAAAAGC GGCTGCGCGA ACTCGGCGAC GAGGGCGTGC TGGCGCTGAT CGGTGATTCC
ACCAATGCGG TGCGCGACGG ACGTTCGCCG TCGGAGACCG AGGTGGGCGC GTCGCTCACC
GGCTTGATCA AGGCCGCCAA GGGCCGCGTC GCGGTGACGA CCTTCGCCTC GAATGTCGGT
CGCATTCATG CCGTCGCCCA AGCCGCTAAG GCGGCTGGGC GGGAAGTGGT GCTGGTCGGT
CGCGCGATGG ACCGCGTCTC GAACGTCGCG CGCGAATGCG GCTATCTCGA CGGCATTCAG
GGTTTCCGCG GGCCCGAATA TTATGGCCAT TTCCCGCCGG ACAAGGTGCT GGCGCTGTGC
ACCGGCAGCC AGGGCGAGCC GCGCGCGGCG CTGGCGCGGA TCGCGCGCGA CGATCATCCC
GAGATCACCC TGAACAAGGG CGACTGCGTG ATCTTCTCGT CGCGCACCAT TCCGGGCAAC
GAGAAGGCGG TCGGCAGCAT CATCAACGGG CTGGTCAACC AGGGCATCGA GGTGATCACC
GACCGCGATC ATCTGGTGCA CGTCTCCGGC CATCCGCGCC GCGAAGAACT GCGCGAGATG
ATCTCCTGGG TGCGGCCGCA ACTGCTGATT CCGGTGCACG GCGAGGCGCT GCATCTCAAC
GAGCACGCCA AGCTGGCGCG GCAGATGGGT GTGCCCAAGG TGATGGTCTG CCGCAACGGC
GATCTGGTCC GGCTTGGGCC GGGTGACCCA GCGATCATTG AACAATTGCC GTCGGGCCGG
CTCTACAAGG ACGGCGCCAT CCTCGAAGAG GAAAAGTCGC GCGCGGTGGT CGAACGTCGC
AAGATGGCGT TCGCCGGCTG CGCCTTCGTG ACGCTGGCAT TGACCCAGGC CGGCGAGCTG
GTCGACGATC CAGAAGTCGA ACTGATCGGC ATTCCGGAAA ACAACAGCGC CGGCGAGCCG
CTCGACGACA TCGTGTTCGA CGCCGTCGTG TCGACGGTCG AAGGGTTGCC GAAGGCGCGC
AGGCGCGATC CCGATGCGGT CGCGGAATCG GTGCGGCGCA CGGTGCGCTC TGTGGTGCAG
ACGGAGTGGG GCAAGAAGCC GTTGTGCTTC GTGCACGTGC TGAAGGTTTA G
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| Protein sequence | MARPDELTFA PLGGVGEIGM NLSIYGLGNR HQRSWLAVDL GVSFGDEEHL PGIDLIMPDV
RFLEKEKKNL VGLVLTHAHE DHFGAIIDLW PKLRCPIYAT KFSAALFAAK LAAERTTLKI
PITEVPSGGR IDLGPFNIEF IPVAHSIPES HALAIRTSAG LVLHTGDWKI DPTPVVGPPT
DEKRLRELGD EGVLALIGDS TNAVRDGRSP SETEVGASLT GLIKAAKGRV AVTTFASNVG
RIHAVAQAAK AAGREVVLVG RAMDRVSNVA RECGYLDGIQ GFRGPEYYGH FPPDKVLALC
TGSQGEPRAA LARIARDDHP EITLNKGDCV IFSSRTIPGN EKAVGSIING LVNQGIEVIT
DRDHLVHVSG HPRREELREM ISWVRPQLLI PVHGEALHLN EHAKLARQMG VPKVMVCRNG
DLVRLGPGDP AIIEQLPSGR LYKDGAILEE EKSRAVVERR KMAFAGCAFV TLALTQAGEL
VDDPEVELIG IPENNSAGEP LDDIVFDAVV STVEGLPKAR RRDPDAVAES VRRTVRSVVQ
TEWGKKPLCF VHVLKV
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