| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2835 |
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| Symbol | |
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| ID | 4023333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3158315 |
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| End bp | 3159010 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637963033 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_569964 |
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| Protein GI | 91977305 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.160416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCTTA ACGATTATGC GCTTCTGCCC GCCTCGCCAT TACGGTCCGT TCCTGTTAGG
CAGATTCACA TGACCAGTCC TCTCGCTCCC TCGGCCGCCG ACGCACTGCT GTTCGATCTC
GGCGGGGTCG TGATCGACTT CGATCTCGCG CGTACGCTCA AAGCCTGGGC GGTCGAACTC
GGCAACGATC CCTCTGCGAT GCTGGCGACG CTGGCGCGCA ACGACACTTT CCATCGCTAT
GAGACCGGCC ACGTCACCGA CGCGGAATTC TTCGCCTCCG TACGCGCGGC GCTGCGGCTC
GATCTCAGCG ACGATCAACT GCGCGAGGGC TGGAACGCGA TCTTCGTCGG CGAAATTGCG
GGCATCGCGC CGCTGTTGGC GCGGGCCGCG AGTCGTCTGC CGCTGTATGC GCTCTCCAAT
ACCAACGATG CGCACATCGC GCATTTCTCG GAGCGCTACA GCGGCTTGCT GAAGCCGTTT
CGGGAATTGT TCCTGTCGTC GCAGATCGGA CTGCGCAAGC CGAACGCCGA GGCTTACGAC
TTCGTCGTGA ACGCGATCGG CGTTGCGCCG TCGCGCATTG TGTTCTTCGA CGATCTGGCC
GAAAATATCG AGGCTGCGCG CAAGCGCGGG CTGCAGGCCG TCCATGTCCG CTCCAGCGCG
GATGTGGCGC AAGCGCTGGA TCAACTCGGG CTGTAG
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| Protein sequence | MFLNDYALLP ASPLRSVPVR QIHMTSPLAP SAADALLFDL GGVVIDFDLA RTLKAWAVEL
GNDPSAMLAT LARNDTFHRY ETGHVTDAEF FASVRAALRL DLSDDQLREG WNAIFVGEIA
GIAPLLARAA SRLPLYALSN TNDAHIAHFS ERYSGLLKPF RELFLSSQIG LRKPNAEAYD
FVVNAIGVAP SRIVFFDDLA ENIEAARKRG LQAVHVRSSA DVAQALDQLG L
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