Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2826 |
Symbol | |
ID | 4023324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3147935 |
End bp | 3148708 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637963024 |
Product | triosephosphate isomerase |
Protein accession | YP_569955 |
Protein GI | 91977296 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.14857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGTCC CCGCCGTTCG TTCGCTGATT GCCGGAAACT GGAAGATGAA CGGCCTCAAG GCCGCGTCGT CGGAGTTCGA CGCTATGCTG GAGGGCGCGA CCGAGCTGTC ATCGGGGATC GATCTGCTGG TGTGCCCGCC GGCAACGCTG ATCGCCGCGT TTGCCGACAG GCTTGCCGCC AACGAGAAGG GCGCGCTTGC GGTCGCGATC GGCGCCCAGG ATTGCCATGC CAACGCCACC GGCGCCCATA CCGGCGACAT CTCGGCCGAA ATGCTGGCCG ACGCCGGCGC CCGCGCGATC ATCGTCGGTC ATTCCGAGCG CCGCGCCGAT CACGGCGAGA CCGACGCGAT CGTCCGCACC AAGGCGCAGG CGGCGTGGCG GGCCGGGCTG GTCGCGATCG TCTGCGTCGG CGAGACCCAG GGCGAACGCA ATGCCGGGCA CACTCTGGAC GTTGTCGCCG GCCAGCTCGC CGGCTCGCTG CCCGACGGCG CCACCGCCGC CAATCTGGTG GTGGCCTATG AGCCGGTCTG GGCGATCGGC ACCGGCATGA CCCCGACCGC GGCTGATGTC GAGGAAGTTC ATGGCTTTAT TCGTCAGACT CTGACGCAGC GCTTTAACGC CGAAGGCGAC CAGATGCGGC TGCTGTATGG CGGCTCGGTG AAGCCCTCGA ATGCCCGCGA ACTGATGTCA GTCCCGCATG TCAACGGCGC GCTGGTCGGC GGCGCCAGCC TGAAGGCGTC GGACTTCCTT GCGATTGCCG CCGGGTGTCC CTAA
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Protein sequence | MPVPAVRSLI AGNWKMNGLK AASSEFDAML EGATELSSGI DLLVCPPATL IAAFADRLAA NEKGALAVAI GAQDCHANAT GAHTGDISAE MLADAGARAI IVGHSERRAD HGETDAIVRT KAQAAWRAGL VAIVCVGETQ GERNAGHTLD VVAGQLAGSL PDGATAANLV VAYEPVWAIG TGMTPTAADV EEVHGFIRQT LTQRFNAEGD QMRLLYGGSV KPSNARELMS VPHVNGALVG GASLKASDFL AIAAGCP
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