| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2718 |
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| Symbol | |
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| ID | 4023216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3034049 |
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| End bp | 3034840 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637962917 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_569848 |
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| Protein GI | 91977189 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.13665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATCG ATAGTCACTG CCATCTCGAC TTTCCGGATT TCGCCGACGA CCTCGACGGC
ATCGTCGCGC GTGCGGCGGC GTCCGGCGTC GGGCGGATGG TGACGATCTC GACGCGGGTG
CGCCGGCTGC CTGAGCTGCT GGCGATCGCC GAGCGGTTTC CGAACGTGTA CTGCTCGGTC
GGCACCCATC CGCATCACGT CGACGAGGAA GACGGCATCA GCGCCGACGA ACTGGTGGCG
CTGGCGCAGC ATCCGAAGGT GGTCGCGTTC GGCGAGGCGG GGCTCGACTA CTTCTACGAA
CACGGCGCGC GCGACGCGCA GGAGCGGGGA TTCCGCGAAC ACATTTCCGC CGCACGCGCC
ACAGGTTTGC CTCTGGTGAT TCACACCCGC GAGGCGGACG CCGATTGCGG CAAGATCCTT
GCCGACGAGA TGGGGAAGGG CGCGTTTCGC GCCGTGCTGC ACTGCTACAC CGGCGGTCGC
CACCTCGCCA TGCAGGCGAT CGATCTCGGG CTATCGATTT CGTTCACCGG GATTCTCACC
TTCAAGAAAT CGCAAAGCCT GCGCGACCTC GCAGCCGAGC TGCCGGCCGA CCGCGTGATG
GTCGAGACCG ACGCGCCGTA TCTGGCGCCC GGCAAATATC GCGGCAAGCG CAACGAGCCG
GCTTACGTCG TCGAGACCGC CAAGGTTCTG GCCGAAATCC GCGGCGTCAC GCTCGACGAG
ATCACGCGGC AGACCACGGA GAATTTCTTT CGCCTGTTCG GAAAAGTGCC GCCGCCCACC
GCAACCGCAT GA
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| Protein sequence | MLIDSHCHLD FPDFADDLDG IVARAAASGV GRMVTISTRV RRLPELLAIA ERFPNVYCSV
GTHPHHVDEE DGISADELVA LAQHPKVVAF GEAGLDYFYE HGARDAQERG FREHISAARA
TGLPLVIHTR EADADCGKIL ADEMGKGAFR AVLHCYTGGR HLAMQAIDLG LSISFTGILT
FKKSQSLRDL AAELPADRVM VETDAPYLAP GKYRGKRNEP AYVVETAKVL AEIRGVTLDE
ITRQTTENFF RLFGKVPPPT ATA
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