Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2715 |
Symbol | |
ID | 4023213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3030625 |
End bp | 3031383 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637962914 |
Product | thymidylate kinase |
Protein accession | YP_569845 |
Protein GI | 91977186 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.956607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGAAA AAACTCCGAG AACGAACTCA ATGCACGGCC GTTTCATCAC CTTCGAAGGC GGTGAAGGCT CTGGCAAATC GACGCAGATC AAGCTGCTGG CGAAACGGCT GGAGGGGGCC AATTTGCGCA CTCTGGTCAC GCGCGAGCCG GGCGGCTCGC CCGGCGCGGA GATCGTCCGC CACTTGCTGC TGGCTGGCGT CGGCCGGCTG ATCGGCGGCG CGGAGGCCGA GGCGCTGCTG TTCGCCGCCG CCCGCGACGA CCACGTCCGG ACCCTGATCC AGCCGGCGCT GGAGAGCGGA GTCTGGGTGC TCTGCGACCG GTTCTTCGAT TCCACCCGGG TCTATCAGGG CCGTCTCGGC GAGGTCAGCC CTGCAATGCT GAACGCGCTG CAGGACGTGA CGATCGGCGC CATGAAGCCG GACCTGACCG TGATCCTCGA TGTGCCGGTC GAGATCGGCC TGGCGCGGGC CGCTGTGCGT CGCGGCAGCG AAGCGCCCGA CCGGTTCGAA TCGGAGAGTA TCGATTTCCA TCGCCGGCTG CGCGACGCCT ACCGGCAGAT CGCCGCCGCC GAGCCCGAGC GCTGCGTGGT GATCGACGCC AATGCCGAGC CGCATGTGGT CGCCGCCCGG ATCTGGCTGA CGGTGCAGGA GCGGCTGCTG GGATGGCCGC AGGCCAAAGT GGAGGTCAAG CCCGAGGCAA AGTCCAAGGC AGAATCCAAG GCAAAGACGA AGTCCAAGGC AAAGGCGAAA TCGGCATGA
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Protein sequence | MVEKTPRTNS MHGRFITFEG GEGSGKSTQI KLLAKRLEGA NLRTLVTREP GGSPGAEIVR HLLLAGVGRL IGGAEAEALL FAAARDDHVR TLIQPALESG VWVLCDRFFD STRVYQGRLG EVSPAMLNAL QDVTIGAMKP DLTVILDVPV EIGLARAAVR RGSEAPDRFE SESIDFHRRL RDAYRQIAAA EPERCVVIDA NAEPHVVAAR IWLTVQERLL GWPQAKVEVK PEAKSKAESK AKTKSKAKAK SA
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