Gene RPD_2705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2705 
Symbol 
ID4023203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3021610 
End bp3022437 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content65% 
IMG OID637962904 
Productenoyl-CoA hydratase 
Protein accessionYP_569835 
Protein GI91977176 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.492104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.320789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTC TGCCCGCCTT CACGGCGACC TCGCCGTCGC CAATTCTGCT GCGCGAAACA 
ATCGACGGCG GCGTCGCTGT GCTGACATTG AACCGCCCGG CCGCCCGCAA CAGCCTGTCA
CTCGAACTGA TCAACGATCT GCACGCCGCG CTCGATCTGA TCGGTCGTGA CGACGGCGTC
CGCGCTGTGG TGATCGCCGC CAACGGGCCG GCTTTCTCGG CCGGTCACGA TATGAAAGAG
TTGACCGCGC ATCGCAATGA CGCCGATCGC GGACGCGCCA GCTTCACCCG GATCATGACC
GCATGCAGCG CGATGATGCA GGCGGTCGTT CTGCTGCCGA AGCCGGTGAT CGCCGCGGTT
CAGGGCGTCG CCACTGCGGC GGGCTGCCAG CTGGTAGCGA GCTGCGATCT CGCGGTCGCT
TCCGAGCAAG CGACGTTCGC AACGCCGGGC GTTGATATCG GGCTGTTCTG CTCGACGCCG
ATGGTGGCGC TGACGCGCAA CGTGCCGCGC AAGCACGCGA TGCACATGCT GCTGACCGGC
GAGCCGGTGA GCGCAGAGGA CGCCCGTGCG ATCGGACTGA TCAATCGTGT CGTGCCGCAT
GGCGGCGAGC GCGACGCTGC GATCGCGCTC GCCAGTCAGA TCGCGAGCAA GTCGTCCCAC
ACCATCAAGA TCGGCAAGGA AGCGTTCTAT CGTCAGGCCG AGCTCAGCCT GGCCGACGCC
TATCACTACG CGTCGCAAGT GATGGCTGAG AATATGATGG CCCAGGACGC CGAAGAAGGC
ATCGGCGCCT TCCTCGACAA GCGCAAGCCG GAATGGAAAG ACTGCTGA
 
Protein sequence
MTALPAFTAT SPSPILLRET IDGGVAVLTL NRPAARNSLS LELINDLHAA LDLIGRDDGV 
RAVVIAANGP AFSAGHDMKE LTAHRNDADR GRASFTRIMT ACSAMMQAVV LLPKPVIAAV
QGVATAAGCQ LVASCDLAVA SEQATFATPG VDIGLFCSTP MVALTRNVPR KHAMHMLLTG
EPVSAEDARA IGLINRVVPH GGERDAAIAL ASQIASKSSH TIKIGKEAFY RQAELSLADA
YHYASQVMAE NMMAQDAEEG IGAFLDKRKP EWKDC