Gene RPD_2637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2637 
Symbol 
ID4023134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2956225 
End bp2956938 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content69% 
IMG OID637962835 
Producthypothetical protein 
Protein accessionYP_569767 
Protein GI91977108 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0592932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000885081 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCATTGA CCCCCGAAGC CATTGCCACC CTTGCGCGCG TTTCGACCGC GACCATCACC 
ACGGTGTTGC TGAAGAAGGG GCTGCGCAAT GTCTGGCTGC GTGGCGCGCG GCCGCTGCGG
CCGGGCCAGC CGCGGCTCGT CGGCGAGGCG TTCACGCTGC GCTTCGTGCC GGCGCGTGAG
GACCTTGCGA CGCCGGAATC CTGGGCCTCG CCGATCTCGA CCCGCGCCGC GATCGAGGCG
ATGCCGGAAG GCTGCATCGC CGTGATCGAT GCGATGGGCG TCAGCGACGC CGGCGTGTTC
GGCGACATTC TCTGCGCGCG GATGGTGAAG CGCGGCATTA CGGCGCTGAT CACCGACGGC
GTGGTGCGCG ATCTCGAAGG CGTACTCGGC ACCGGCCTGC CGGTGTGGTG CAACGGCGCC
GCGGCGCCGC CCTCGGTGGC GGGGCTTACA TTCGTCGGTT GGGGTGAGCC GATCGGCTGC
GGCGGGGTCG CCGTATTCCC GAAGGATGTG ATCGTCGCCG ACCAGGACGG CGCGGTTCTG
ATCCCGCAGG CGCTGCTCGA CCATGTCCTG GCGGAAGGCC CGGAGCAGGA GCGGATGGAG
GGCTGGATCG TCGAGGAGGT CAACAACGGC GCGGTGCTGC CGGGGCTTTA TCCGATGAAC
GCAGAAACCA AGGCCCGCTA TGCCGCGTTC AAGGAAAAGG CGGGCAAGGC GTAA
 
Protein sequence
MSLTPEAIAT LARVSTATIT TVLLKKGLRN VWLRGARPLR PGQPRLVGEA FTLRFVPARE 
DLATPESWAS PISTRAAIEA MPEGCIAVID AMGVSDAGVF GDILCARMVK RGITALITDG
VVRDLEGVLG TGLPVWCNGA AAPPSVAGLT FVGWGEPIGC GGVAVFPKDV IVADQDGAVL
IPQALLDHVL AEGPEQERME GWIVEEVNNG AVLPGLYPMN AETKARYAAF KEKAGKA