Gene RPD_2572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2572 
Symbol 
ID4023066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2883740 
End bp2884471 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content68% 
IMG OID637962768 
Producthypothetical protein 
Protein accessionYP_569703 
Protein GI91977044 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.328993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0276515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCG ATCCGAAACC GCAACTGGCC CCGCTCGCCG AGGCGATTCC CGAATGCCCG 
CGTTGCGGCA AGCCGGTGCC GCTGTGCATC TGCGACAGCG TCGAGCCGAT CCAGAGCCGC
ATCCAGCTCC TGATCCTGCA GCACCCGCAG GAGCAGGACC GCGCGCTCGG CACCGCGCGG
CTCACCGCGC TGCATTTCAA GAATGCGGTG GTGAAGATCG GGCTGTCATG GCCGAGCCTG
TCGAAGGCGC TGGGCCGGAC GGTGCGCGAT CCGTCGCGCT GGGCGGTGCT TTATCTCGGC
TCCGCGCGCG CCGCGGAACT CGCGACCGGC GCCGAGATCA TCGCGATCGA CCGCAAGGGG
CTGGCCGAGC ACTATCAGGA GGACATCCTC GACGACATCG AGGGCGTGGT TCTACTCGAC
GGCACCTGGA GCCAGGCCAA GGCGCTGTGG TGGCGCAACG CCTGGATGCT GAAATGCCAG
CGGGTCATCC TCGATCCGGC GGCTCCGTCG CGCTACGGCA AGCTCCGCAA GGAGCCGCGC
AGCGACGGCC TGTCGACGCT GGAGGCCGCA GCTTTGCTGA TGTCGCGCCT GGAGCCGAGG
CCGCAGATCG AGACCGTTCT GCTGGCCGCG TTCGACCGGA TGCTGACGCG CTATCGCGAG
GTCCAGGCGG AAATGCCGGA ACTGGCGCCG AAGCCGAAAA AGCGCGACTA CCGACGCAAG
AAGCGCGGCT GA
 
Protein sequence
MTTDPKPQLA PLAEAIPECP RCGKPVPLCI CDSVEPIQSR IQLLILQHPQ EQDRALGTAR 
LTALHFKNAV VKIGLSWPSL SKALGRTVRD PSRWAVLYLG SARAAELATG AEIIAIDRKG
LAEHYQEDIL DDIEGVVLLD GTWSQAKALW WRNAWMLKCQ RVILDPAAPS RYGKLRKEPR
SDGLSTLEAA ALLMSRLEPR PQIETVLLAA FDRMLTRYRE VQAEMPELAP KPKKRDYRRK
KRG