Gene RPD_2515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2515 
Symbol 
ID4023006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2814355 
End bp2815050 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content62% 
IMG OID637962708 
Productcyclic nucleotide-binding 
Protein accessionYP_569646 
Protein GI91976987 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.513928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.4337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCCC GTGACGCTGC CTATGAGGTG GTCAGCACCC GGGGCTGGCT CAGCCTGACA 
CCGGCCGCGT TTCGAGGCGC GGTGCTCGAG CGCTGCCAGC TGCAGGAATT TGGTGCCGGC
GTGCCGGTCT ATGTGATCGG CGATGAGGCG GGCGGCCTCT ATGGGCTGGT CAAAGGGGCG
CTCGGCATCG CAATCGCTCC TCGGGAAAAT GGTCCCTACA CAGGGCATTT GGCGATGCCC
GGCAGCTGGT TTGGCCAGAT ATCAGCCTTT ACCCGTCAGC CCAGGCGGGT CGGCCTCACT
ACGACCCGGC CGACAGTCCT GCTGCATCTG CCTTTGCATG GGCTGGACGA AATCGTCAGG
TGCGATCCCG CCGCTTGGCG GTTATTTGGC CTCATAACCA TCGAACATCT CGATCTCTCG
ATGGGGAGCT CCAACGACCT GATGATCCGC GATCATTTCA AGCGCTTCGT GGCCGTCCTG
CTTCGCCTTG GCGACTGTCG CGTCGCCGAT CCGCCGAGCG GGCAAGCGAT CGAGATCGAT
ATCGTTCATG AAGAGATCGC CTATATGGCC AACGTCGCAC GGACCACGGC AGGCGCCATC
CTGCGCAAGC TCGAGGCGGA GGGGCACCTG GCGCTGTCCT ATCGCCGTGT CAGCATTCTT
GCCCCGGCTG CACTGAGAAA GATGTTGCAA AACTAA
 
Protein sequence
MLARDAAYEV VSTRGWLSLT PAAFRGAVLE RCQLQEFGAG VPVYVIGDEA GGLYGLVKGA 
LGIAIAPREN GPYTGHLAMP GSWFGQISAF TRQPRRVGLT TTRPTVLLHL PLHGLDEIVR
CDPAAWRLFG LITIEHLDLS MGSSNDLMIR DHFKRFVAVL LRLGDCRVAD PPSGQAIEID
IVHEEIAYMA NVARTTAGAI LRKLEAEGHL ALSYRRVSIL APAALRKMLQ N