Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2515 |
Symbol | |
ID | 4023006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2814355 |
End bp | 2815050 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637962708 |
Product | cyclic nucleotide-binding |
Protein accession | YP_569646 |
Protein GI | 91976987 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.513928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.4337 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGCCC GTGACGCTGC CTATGAGGTG GTCAGCACCC GGGGCTGGCT CAGCCTGACA CCGGCCGCGT TTCGAGGCGC GGTGCTCGAG CGCTGCCAGC TGCAGGAATT TGGTGCCGGC GTGCCGGTCT ATGTGATCGG CGATGAGGCG GGCGGCCTCT ATGGGCTGGT CAAAGGGGCG CTCGGCATCG CAATCGCTCC TCGGGAAAAT GGTCCCTACA CAGGGCATTT GGCGATGCCC GGCAGCTGGT TTGGCCAGAT ATCAGCCTTT ACCCGTCAGC CCAGGCGGGT CGGCCTCACT ACGACCCGGC CGACAGTCCT GCTGCATCTG CCTTTGCATG GGCTGGACGA AATCGTCAGG TGCGATCCCG CCGCTTGGCG GTTATTTGGC CTCATAACCA TCGAACATCT CGATCTCTCG ATGGGGAGCT CCAACGACCT GATGATCCGC GATCATTTCA AGCGCTTCGT GGCCGTCCTG CTTCGCCTTG GCGACTGTCG CGTCGCCGAT CCGCCGAGCG GGCAAGCGAT CGAGATCGAT ATCGTTCATG AAGAGATCGC CTATATGGCC AACGTCGCAC GGACCACGGC AGGCGCCATC CTGCGCAAGC TCGAGGCGGA GGGGCACCTG GCGCTGTCCT ATCGCCGTGT CAGCATTCTT GCCCCGGCTG CACTGAGAAA GATGTTGCAA AACTAA
|
Protein sequence | MLARDAAYEV VSTRGWLSLT PAAFRGAVLE RCQLQEFGAG VPVYVIGDEA GGLYGLVKGA LGIAIAPREN GPYTGHLAMP GSWFGQISAF TRQPRRVGLT TTRPTVLLHL PLHGLDEIVR CDPAAWRLFG LITIEHLDLS MGSSNDLMIR DHFKRFVAVL LRLGDCRVAD PPSGQAIEID IVHEEIAYMA NVARTTAGAI LRKLEAEGHL ALSYRRVSIL APAALRKMLQ N
|
| |