Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2467 |
Symbol | |
ID | 4022958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2757135 |
End bp | 2757857 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637962660 |
Product | aquaporin Z |
Protein accession | YP_569598 |
Protein GI | 91976939 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.12503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.220778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTGA ATAAGTACGT CGCTGAGTTG ATCGGCACCT TCTGGCTGAC CTTTGCCGGT TGTGGCAGCG CGGTGATCGC CGCGGGATTT CCCGAGGTCG GGATCGGCCT GGTCGGCGTG TCGCTGGCGT TCGGCCTCAG CGTCGTCACG ATGGCCTATG CGATCGGCCA TATCTCGGGC TGCCACCTCA ACCCCGCGGT GACGCTGGGC CTCGCCGCCG GGGGACGTTT CCCGCTCGGG CAGATCGCGC CCTACATCAT CGCGCAGGTG CTCGGCGCGA TCGCCGCCTC GGCCTTGCTC TATCTGATCG CCAGCGGCGC GCCCGGCTTC GACCTCGCCA AGGGCTTCGC CTCCAACGGC TACGCCGCGC ATTCGCCCGG CCAGTACAAT CTCGTCGCGT GCTTCGTGAT GGAAGTCGTG ATGACCATGA TGTTTCTGAT CGTCATCATG GGCTCCACCC ACGGCAAGGC GCCGGCCGGC TTCGCGCCGC TGGCGATCGG ACTTGCGCTG GTGATGATCC ATCTGGTCAG CATTCCGGTG ACCAACACGT CGGTCAATCC GGCGCGCAGC ACCGGACCGG CGCTGTTCGT CGGCGGCTGG GCGATCGGCC AGCTCTGGCT GTTCTGGGTT GCGCCGCTGA TCGGCGGCGT GCTCGGCGGC GTGATCTATC GCTTCCTCAG CCCGCAGCCG ACCGGCGTGG TCGAAGGCGT CAAGCCGAAG TAA
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Protein sequence | MSLNKYVAEL IGTFWLTFAG CGSAVIAAGF PEVGIGLVGV SLAFGLSVVT MAYAIGHISG CHLNPAVTLG LAAGGRFPLG QIAPYIIAQV LGAIAASALL YLIASGAPGF DLAKGFASNG YAAHSPGQYN LVACFVMEVV MTMMFLIVIM GSTHGKAPAG FAPLAIGLAL VMIHLVSIPV TNTSVNPARS TGPALFVGGW AIGQLWLFWV APLIGGVLGG VIYRFLSPQP TGVVEGVKPK
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