Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2450 |
Symbol | |
ID | 4022941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2736533 |
End bp | 2737099 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637962643 |
Product | cytochrome B561 |
Protein accession | YP_569581 |
Protein GI | 91976922 |
COG category | [C] Energy production and conversion |
COG ID | [COG3038] Cytochrome B561 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.220422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACGA CAACCCTCGA CTCTGCCGAC AAAAGTCCCA GTGAATACGG CGCCCTCGCC GTCACCATTC ACTGGGTGAT CTTCTTCGCC GTGATCGCGC TATTCGCCTC AATGAACTAC GCGCAAGAAC TGGACAAGGC CGACCCGCTC CGTCGCACGT TTTACGACTG GCACAAGGCG ATCGGTACTT TGGTACTGGG TTTGGCGGTG CTGCGCGTTC TGTGGATCAA GATCCACGGT GCACCGGATT TGGTTCCGTC GCCGCGCTTC AGCAAGGTGA TCGCCCGGAT CAGCCACGGC CTGTTATATC TGCTGCTGCT CGCCCTGCCG GCGACCGGTC TGGGAATGAC GCTGTTTTCC GGTCGCGGAA TCGATCTGCT CGGCATCCCG CCACTGCTCG AAGCAGACAA GGCGGTGGCC GGCGCTCTGC ACGCGGCACA TGGACCGCTG TTCCTGGCGA CGGTCATCGT GGTCTTCATC CACGTCGTCG GGGCGCTGTG GCATCAGTAC GTTCGGCACG ACTCCACGCT CGGCCGCATG GTGCCGTGGC TGCGCGCCAA GGACTAA
|
Protein sequence | MTTTTLDSAD KSPSEYGALA VTIHWVIFFA VIALFASMNY AQELDKADPL RRTFYDWHKA IGTLVLGLAV LRVLWIKIHG APDLVPSPRF SKVIARISHG LLYLLLLALP ATGLGMTLFS GRGIDLLGIP PLLEADKAVA GALHAAHGPL FLATVIVVFI HVVGALWHQY VRHDSTLGRM VPWLRAKD
|
| |