| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2289 |
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| Symbol | |
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| ID | 4022774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2552543 |
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| End bp | 2554171 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637962481 |
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| Product | superfamily I DNA/RNA helicase-like protein |
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| Protein accession | YP_569422 |
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| Protein GI | 91976763 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.121386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.561686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGAGC GCGCCCGTCA GCTGCTAAAT CATCCCGACG ACCGACGCGG CGTCGCGTTC
CTGTCCTTTA CAAACGCCGC GGTCGACGAG CTGGAGGCAC GCCTCCGCGC CTTTGGCGTG
CTCCCGGCGC CGCTGTTTCC GAGTTTTATC GGAACGTTCG ATCGATTTCT CTGGCAGTTT
TTGATCGCGC CGTTCGGCAT TCCCGATTGC GATCAATTAC CGAAGCTTGT CCCCGACAAA
AGCAATTGGG AGGTGAAGCC GCCCTACGAC GGTGCGCAGG CGCTCCGGTT GCGTTGCTTT
GACCGAGCGA CGGGCAAGGT TATTCCCGCT CTCGCAAAGG ACGAGGGCTT CGATGTCGAC
AAGCGCCAGA TCGCGGCGCA TGAGACCAGC GCGCTCTCCA CGATCAAACG TGCGCGAAGC
CACGGCCAAA TCGACTTCGA AGATGTCCGC GTCTGCGTCC GTGAAAGGCT GTCAGACGTA
GCCTTCGCCA AGCGCGTCGG TGCCGCGCTC GCTGCCCGAT TTCGGGAGAT CATTGTCGAC
GAAGCCCAGG ACTGCAATCC CGCCGATCTT CAGATCGTCG ATTGGCTTCG GGCATCCGGG
ATCAGGGTGA AGGTCATCTG CGACCCCCAC CAGTCGATCT ACGAATTCCG GGGCGGCGTG
ACCGACGAAC TTCAACGGTT CGCCGCGACA TTCGACGCAA CGGATCGTTT GCCGATGAGC
GGCAATTTCA GATCAAGCCC GGCAATCTGC GCGGCGATCG TGACGCTTCG ACCGCCGTCA
TCGCGGTCCG ATCCGGATAA GCCGTTGGGT CCGCATCGCA ACGATACGAC GCCCGTCCAT
ATCCTGTCGT ACGGCGGAAG CGCGGTCTCT CCGGCTATCG GCTCAACCTT CCGAGGCCTC
GTCGAAGGCC TGAGCATCCT CTTACATCTC GCGCCGGTTC TGGCGTCCAC GCGGGCCAGT
GCTTCAAAAG CCATCGGTCA GCCGACGATT GAGCCGACCG CCCACATGAC GCTCCTTCTG
GCGGAAGCGG CCATGAACTA TCATTTCGCG TTCGCTGTAG GAAATCGTCG TGACGCACTC
GTCAACCTGC ACCGCATCGT CCTGCTGGTT CAGGGCCGCA TCGGTGCGTT GGGAGGCTAT
CACAGCTACC TGTTGAGCGA AGGGCTTGAG GACGGCCGCT GGCGTCCGGA GATCATCGCG
CTCGCCAATG GCCTCCGCTT CGACCAGGCC GATACCGTTG ATCGATGGCT GGCCAGAGCG
CGCAGCCTTC TCGTCACCGG CCTCGTCGTA AACTCCACCA TCAACCAGCG CCTCAAAGGG
CACGCAGACC TGACGACGGC GCTCGCACGC GCGCCGACAA ATTCTTCGCC GGCCCGCACA
ATCCACTCCG TGAAGGGGCA AGAATTTCCC GGAGTGTGCG TGGTGATGAC GACGAAGACC
GCTGGCGCGA TCATCGACCT CCTCGAAGGC CAAACCTCAA CGGGCGCTGA CGAAGAGGCC
CGCAAGATCT ACGTCGGAGC CTCTCGAGCG GAACGCCTGC TCGCGATTGC TGTCCCGAAA
AGCCGGGCCG AACGACTCCA GACACTTCTC ACCAATGGTG GGTGTGAGGT CCGTCTCCAT
CAAATCTGA
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| Protein sequence | MVERARQLLN HPDDRRGVAF LSFTNAAVDE LEARLRAFGV LPAPLFPSFI GTFDRFLWQF
LIAPFGIPDC DQLPKLVPDK SNWEVKPPYD GAQALRLRCF DRATGKVIPA LAKDEGFDVD
KRQIAAHETS ALSTIKRARS HGQIDFEDVR VCVRERLSDV AFAKRVGAAL AARFREIIVD
EAQDCNPADL QIVDWLRASG IRVKVICDPH QSIYEFRGGV TDELQRFAAT FDATDRLPMS
GNFRSSPAIC AAIVTLRPPS SRSDPDKPLG PHRNDTTPVH ILSYGGSAVS PAIGSTFRGL
VEGLSILLHL APVLASTRAS ASKAIGQPTI EPTAHMTLLL AEAAMNYHFA FAVGNRRDAL
VNLHRIVLLV QGRIGALGGY HSYLLSEGLE DGRWRPEIIA LANGLRFDQA DTVDRWLARA
RSLLVTGLVV NSTINQRLKG HADLTTALAR APTNSSPART IHSVKGQEFP GVCVVMTTKT
AGAIIDLLEG QTSTGADEEA RKIYVGASRA ERLLAIAVPK SRAERLQTLL TNGGCEVRLH
QI
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