Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2012 |
Symbol | |
ID | 4022494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2251297 |
End bp | 2252022 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637962205 |
Product | winged helix family two component transcriptional regulator |
Protein accession | YP_569148 |
Protein GI | 91976489 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.566736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.606644 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCGAG AAAGTCTGAA GCCCTTGAGC GAATCCGATG CCAATATGCG CCTGCTGATC ATCGAGGATG ACCGCGAATC CGCCGATTAT CTGGTGAAGG CGTTTCGTGA AGTCGGCCAC GTCGCCGATC TCGCCAGCGA CGGCGAAGAG GGCCTCGCGC TCGCCGACAG CGGCGATTAC GACGTGCTGG TGGTCGACCG GATGCTGCCG AAGCGCGACG GCCTGTCGGT GATCGGCACG CTGCGCGAGA AAGGCAACCG CACGCCGGCG CTGATCCTGT CCGCGCTCGG CCAGGTCGAC GACCGCATCA AGGGCCTGCG CGCCGGCGGC GACGACTATC TGCCGAAGCC CTACGCCTTC GCCGAACTTC TGGCGCGCGT CGAAGTTCTG TCGCGCCGCC ATGGCGGCCC CGCCGAGGAA ACCAGCTACC GCGTCGGTGA CCTCGAACTC GACCGGCTGT CGCACCGCGT CACCCGCGGC GGCGAGGAGC TGACGCTACA GCCGCGCGAA TTCCGACTGC TCGAATATCT GATGAAGCAC GCCGGCCAGG TGGTGACCCG CACCATGCTG CTGGAGAACG TCTGGGACTA TCATTTCGAT CCGCAGACCA ACGTCATCGA CGTCCACATC TCCCGCCTGC GCGCCAAGAT CGACAAGGGC TTCGACCGGC CGCTGCTGCA CACCATCCGC GGGGCGGGGT ACATGATCCG TGACGGCATT CGGTAA
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Protein sequence | MVRESLKPLS ESDANMRLLI IEDDRESADY LVKAFREVGH VADLASDGEE GLALADSGDY DVLVVDRMLP KRDGLSVIGT LREKGNRTPA LILSALGQVD DRIKGLRAGG DDYLPKPYAF AELLARVEVL SRRHGGPAEE TSYRVGDLEL DRLSHRVTRG GEELTLQPRE FRLLEYLMKH AGQVVTRTML LENVWDYHFD PQTNVIDVHI SRLRAKIDKG FDRPLLHTIR GAGYMIRDGI R
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