Gene RPD_1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1965 
Symbol 
ID4022447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2204685 
End bp2204972 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content55% 
IMG OID637962158 
Productexcinuclease ABC subunit C 
Protein accessionYP_569101 
Protein GI91976442 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.70444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGT CGTACGACGT CTACATCCTC GCCAGCCGCT ATCGCGGCAC GCTGTATGTC 
GGCGTCACGA ACGACCTGCC GCGCAGGATC GCAGAGCATA AAGCCGGCGC CGCAGATGGC
TTCACCAAGA AATACAACAT CAAGATATTG GTGCACGTTG AAGAATATTC TTCGATTCTC
GAAGCACGCA CCCGCGAACA TGTGCTCAAG CGTTGGCGCC GTGACTGGAA GATCGCGCTG
ATCGAAAAAC TCAATCCAGA TTGGCGCGAT CTATCGAACG ATCTGTGA
 
Protein sequence
MSRSYDVYIL ASRYRGTLYV GVTNDLPRRI AEHKAGAADG FTKKYNIKIL VHVEEYSSIL 
EARTREHVLK RWRRDWKIAL IEKLNPDWRD LSNDL