Gene RPD_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1952 
Symbol 
ID4022434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2189716 
End bp2190294 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content70% 
IMG OID637962145 
Producthypothetical protein 
Protein accessionYP_569088 
Protein GI91976429 
COG category[S] Function unknown 
COG ID[COG5402] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.242476 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCTGA TCTTCTTCAC TTTGCTGGCG CTGATCATCG CTGCGGGCGT CGGCGTCGGC 
GCGACCTGGA TGACGGCGAC GCGCGGCACC GATTTCGGCA CGCTGACGAT CGGCGCGTGG
ACCGCACGGC CGCGCGCCGG CACGGCCGAG ATTGATCCTT ATGCCCGCGC CGCGATCGCG
CGCAGCGGCG AATTACCGAT CGGCGCCGGC GACGGCATCG CCTTCATCGC CACGGCCGAT
GACAGCAAGC GCCCGCTCGA CGGCCGCTGC GACGTCGAGG TCAGCGGCGT CACGCCGGCG
GCGCGCTTCT GGACACTGAC GCTTTACGAT CCGCGCGGCT ATCTGATCGC CAACAGCCTC
GAGCGCTACG GCTTCACCAG CCAGGAAATT TTGCGCGCCG CCGACGGCGA GTTCAAGATC
CGCGTGGCGG CGCGGTCGCG ATCCGGCAAC TGGCTGCCGA CCGGCGGCGT CGATCGCTAC
ATGCTGGTGC TTCGGCTCTA CGACACACCG GTCGGCGTCG CGACCCGCAC CAAGCGCGAC
GCGCCGATGC CGACGATCGC CACACTGGGC TGCCCATGA
 
Protein sequence
MRLIFFTLLA LIIAAGVGVG ATWMTATRGT DFGTLTIGAW TARPRAGTAE IDPYARAAIA 
RSGELPIGAG DGIAFIATAD DSKRPLDGRC DVEVSGVTPA ARFWTLTLYD PRGYLIANSL
ERYGFTSQEI LRAADGEFKI RVAARSRSGN WLPTGGVDRY MLVLRLYDTP VGVATRTKRD
APMPTIATLG CP