Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1845 |
Symbol | |
ID | 4022327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2065249 |
End bp | 2066196 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637962039 |
Product | LysR family transcriptional regulator |
Protein accession | YP_568982 |
Protein GI | 91976323 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.136314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.795683 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGACT TCAAGGCGCT TGAAACTTTC CTTTGGGTCG TGACGCTCGG CAGCTTTCGC GGCGCCGCCC AGAAGCTCAA CACCACGCAG CCCGCGATCT CGCAGCGGAT TGCGCAGCTC GAACGCGAAC TCGGCGTCCG GCTGCTGCAA CGGGATCATC GCATGGCCTC CCCGACCCCG AGTGGTCGGC AGCTGATGCT GTATGCGGAA AAGCTGATCG GGCTGCGCAC CGAAATGCTG GCGGCCGTTG GCGATCAATC GAGCATGCGC GGCGTGCTCC GGCTCGGCGT CGCCGAGACC ATCGTGCACA CCTGGCTGCC GGGACTGATC GAGCGGGTGA ACCGGCTGTA TCCGAACCTG TCGCTGGAGA TCGAGGTCGA CATCACGCCG AACTTGCGCG CACGCCTGCT CGCTCAGGAA ATCGAGCTCG CCTTCCTGCT CGGCCCGATG ACGGCGTCGA CGGTGCGAAG CCGCGTGCTA TGCGAGTATC CGATCGGATT TCTGGCGAGC CCCTCGCTCG GGCTCGGCGC CGGAGAGCTG GCGGTGCAAG ATCTCGCCAA GTTTCCAATC ATTACTTTCC CGCGCAAGAC CCAACCCTAC GAGATCGTGC GCTCGCTGTT CAACAAGCCG GAACTGCCGC CGATCCGGCT GCACGCTTCG GCGTCGCTCG GCACCGTCAT CCACATGGCG ATCGAAGGTC TCGGCGTCGC CGTGATCCCG ACTGCGATCG TCGAAGACGA ATTGGCCGAC GGGCGACTGC AATTGCTGCA GACCAATCTG ACGATTTCGC CGCTGCGATT CTCGGCGAGT TGGCTCGCCT CGCCGGATAC GGCAGCGATC GAGCGCGTCG CCGAACTCGC GGTCGACATC GCCCACACTG GCGGCTTCAT GCCCGAGGCC GCGCAGCTGT GCGCTGCCCT GCCCGCCGCG GAACCGGCGA TAGGTTGA
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Protein sequence | MVDFKALETF LWVVTLGSFR GAAQKLNTTQ PAISQRIAQL ERELGVRLLQ RDHRMASPTP SGRQLMLYAE KLIGLRTEML AAVGDQSSMR GVLRLGVAET IVHTWLPGLI ERVNRLYPNL SLEIEVDITP NLRARLLAQE IELAFLLGPM TASTVRSRVL CEYPIGFLAS PSLGLGAGEL AVQDLAKFPI ITFPRKTQPY EIVRSLFNKP ELPPIRLHAS ASLGTVIHMA IEGLGVAVIP TAIVEDELAD GRLQLLQTNL TISPLRFSAS WLASPDTAAI ERVAELAVDI AHTGGFMPEA AQLCAALPAA EPAIG
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