Gene RPD_1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1740 
Symbol 
ID4022222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1958655 
End bp1959071 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content65% 
IMG OID637961934 
Producthypothetical protein 
Protein accessionYP_568877 
Protein GI91976218 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAGCA AGTGGGCGTT TCGTTGCGCG AGCATTGGTT TGGTGGCTGT TTTTGGTCTG 
TTTGCGGCCA TCGTGACGGC GGTGACGACC ACCCCGGCCC ATGCCGAGGA GGTCACCGGG
GTGTGGTTGC GGGATTCCGG CGCCTCCAAG GTGAAGTTCT CGCCCTGCGG CGGCGCGCTG
TGCGGCACCA TCGTCTGGCT GAAGCCCGGC ACCGACACGC CCGCCAAGGT CGGACAGCGA
GTGTTTTCCG ACATGAAGCC CGCCGGCCCG AACACCTGGA ACGGCAGCGC CTTCAATCCT
GAAGACGGCA AGACCTATAC CGGCAAGATG AGTCTGGCCG GCGGCACCCT CACCACCCAG
GGCTGCGCGA TGGGCGGCAT GATCTGCAAA TCCTCGAACT GGACACGCGC CAACTGA
 
Protein sequence
MRSKWAFRCA SIGLVAVFGL FAAIVTAVTT TPAHAEEVTG VWLRDSGASK VKFSPCGGAL 
CGTIVWLKPG TDTPAKVGQR VFSDMKPAGP NTWNGSAFNP EDGKTYTGKM SLAGGTLTTQ
GCAMGGMICK SSNWTRAN