Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1738 |
Symbol | |
ID | 4022220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1955383 |
End bp | 1956576 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637961932 |
Product | RNA methyltransferase TrmH, group 1 |
Protein accession | YP_568875 |
Protein GI | 91976216 |
COG category | [J] Translation, ribosomal structure and biogenesis [S] Function unknown |
COG ID | [COG0565] rRNA methylase [COG2852] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGTT CCGGCACCGA CAAATCCAAG CCCGCCGCGG ACCTCGCCGG GCCTGTTGTT ATTCTGGTTG AGCCGCAGCT CGGTGAGAAC ATCGGGATGT GCGCCCGTGC GATGGGTAAT TTCGGCCTGA AACGTCTGCG GCTGGTGAAG CCGCGCGACG GCTGGCCGAA CATCGCGGCG CAGCGCGCCG CCGCTGGCGC CGACGATATT CTCGAACAAG CCGAACTGTT CGACACCGTA CGAGAGGCGG TGGCCGACTG CACGCTGCTG TTCGCCACCA CCGCGCGCGC CCACGATCAG GCGAAGCCGG TGCGCGGGCC GGAGGCGGCG GCGCAGGAGA TCGTGACCGC GACCGCGGGC GGCGCGACCG CCGGCATCCT GTTCGGCCGC GAGCGCTACG GCCTTCAGAA CGAGGAAGTC GCGCTCGCCA ACCGCATCGT CACCTTTCCG GTCAATCCCG CCTTCGCCTC GCTCAACCTG GCGCAAGCCG TGCTGCTGAT GGGCTACGAG TGGTTCAAGC ACGCGACCCA AGGCGCGCTG CCGTTCGCGA TGCCGGAGCG CTCCGAACCG GCGTCGCAGC ACCAGATGAC CGCGTTCTTC GACAACCTCG TCGCCGAACT CGACCGCGTC GAGTTTCTCC GCCCGCCGGA GAAGCGCGAC ACCATGCTGG TGAACCTGCG CAACATCTTT ACCCGGATGG AGCCGACCAA GCAGGACATG CACACGCTGC ACGGCGCGGT GATGGCGATC GCCGAAGGCC GCAAGGGCCC GGCCAAGGGC GGCGTGCTCG ACGGCGAGCA GGCGACGCGG CTGCGGGCGC TGCTTGCCGA GCGGACCGCG AGCGGCGCCG ATCACGACGG TGGCTCGATG CGCGGCCTGG CGCGGCTGTT GCGGCGTAAC CCCACCGACG CCGAGCGGCT GCTGTGGGAA AAGCTCCGCA CCGACCGCCG CTTCGCCGGC AACTTCAAAC GCCAGACCCC GGTGGGTCGC CACATTCCGG ACTTCGTTTC GTTCGCCCGC AAGATCGCGA TCGAACTGGT CAACGAAGGC GAGACCGACG CGATCTCGCA GGACCGCGCC GCGCGAAAAG CGTGGCTGGA GGCGCGGGAC TATCAGGTGG TGTGGGTCGA GGCGGTGGCG ATCGAGCAGC AACTCGACGC GGTGCTGGGG CGGCTGGAGA CGGCGATGCA ATAG
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Protein sequence | MAGSGTDKSK PAADLAGPVV ILVEPQLGEN IGMCARAMGN FGLKRLRLVK PRDGWPNIAA QRAAAGADDI LEQAELFDTV REAVADCTLL FATTARAHDQ AKPVRGPEAA AQEIVTATAG GATAGILFGR ERYGLQNEEV ALANRIVTFP VNPAFASLNL AQAVLLMGYE WFKHATQGAL PFAMPERSEP ASQHQMTAFF DNLVAELDRV EFLRPPEKRD TMLVNLRNIF TRMEPTKQDM HTLHGAVMAI AEGRKGPAKG GVLDGEQATR LRALLAERTA SGADHDGGSM RGLARLLRRN PTDAERLLWE KLRTDRRFAG NFKRQTPVGR HIPDFVSFAR KIAIELVNEG ETDAISQDRA ARKAWLEARD YQVVWVEAVA IEQQLDAVLG RLETAMQ
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