Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1651 |
Symbol | |
ID | 4022131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1860031 |
End bp | 1860687 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637961846 |
Product | hypothetical protein |
Protein accession | YP_568789 |
Protein GI | 91976130 |
COG category | [S] Function unknown |
COG ID | [COG4731] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.150043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACAC ATCGACCGAT CCGCTTGTTT GCAATGGCGG CCGCCGCCGT CGTTTCATTC CTGATGTCTG CGCCGGCCCC GGTCGCCGCG GCAGAACCGA CCGCCGTCGG GCTCTGGCAA CGCACCGACA ACGGCAAGCC CACTGGCAAG CCGGTAGTCT GGGTGCTGAT GCTCGACCGC GGCAACAACA TGTACGAAGG CGTCGTCGCC AAGTCGTTTG CGCAGCCCGG CCAGCCCAAC CTGACGGTGT GCGAGGAGTG CGAGGACGAC CGCAAAGGTC AGCCGATCCT CGGCATTTCT CTGATCCGCG ACATGAAGCG GAAGGGCCGG GTCTATGAGG GCGGCAACAT CCTCGATCCA CGCAATGGCG ACGTCTGGAA GGCGATGCTG ACGGTCAGCC CCGACGGCCA GGATCTGACG CTGCGCGGCT ATTTGCTGAC CCCGGCGCTC GGCCAGGACG AGACCTGGCA ACGGCTGCCC GATACGGCGA TCGCCCAGAT CGATCCAGTG ATCGTCGCCA AGTTCATGCC GGAACAGGCC GCGGCGCTCG CCGCCAAGCC GGGCGCCACC GCCGGCAAGC CGAAGGCTAC TACCCCGGCC CCGGCGCCTG CCCCGATGCA GAAGGGCGGC ATGATGGCGC CCGCGCCCGC GAAGTAA
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Protein sequence | MNTHRPIRLF AMAAAAVVSF LMSAPAPVAA AEPTAVGLWQ RTDNGKPTGK PVVWVLMLDR GNNMYEGVVA KSFAQPGQPN LTVCEECEDD RKGQPILGIS LIRDMKRKGR VYEGGNILDP RNGDVWKAML TVSPDGQDLT LRGYLLTPAL GQDETWQRLP DTAIAQIDPV IVAKFMPEQA AALAAKPGAT AGKPKATTPA PAPAPMQKGG MMAPAPAK
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