| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1641 |
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| Symbol | |
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| ID | 4022121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1844370 |
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| End bp | 1850717 |
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| Gene Length | 6348 bp |
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| Protein Length | 2115 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637961836 |
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| Product | hypothetical protein |
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| Protein accession | YP_568779 |
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| Protein GI | 91976120 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAATA ATCCGAAGAA GATCAAAGAT CCGACCGAAG TGGCGCTGTC CGCGATTCAG
GAAGCCCTGA ACATCAGCGA CGCGCCGACG ACAGGCGACG ATCAGATCTC GGTGCGGAGC
GATGGCTCGC CGGCGATCAC CACGCCAGCC GCTTACAACG ACGGCGCGCC GGAGCCGCGG
ATCGCACCCG ACCGTCCCAC TTTCGAACAG GCCGACGAGC GCGCTTTCGC CCAGCGCCCG
GCCAATGACG ATCGTGAGAC CATCGGCCAG CTCCTCCAGG CGCTGCAGAA GGGCCGTCCG
TCCCGCAACG TCTATACACT CGCATCGATC TTCGCCGGCG TCTGGGTGTT CGGCGGCATT
GTGCTGACCG TCAGCTTCCT GCCGTCGCTG CAGGCGATGG TCGGTCAGGG CAGCGGCGGC
ACGATTGCGC TGGTCGGCCT GGTCGCGCTG TTCCTTGCGC CGGTGATGCT GTTCTACTTC
CTCGCGAGCC TGACCTGGCG CGGTCAGGAA TTGCGGATGA TCGCGCAATC GATGGCGCAG
GTCGCGATGC GATTCTCCGA GCCCGAAATT GCGGCGAGCG ATTCCGTCGT AACCGTCGGT
CAGGCGATCC GCCGCGAAGT CGCCGCGATG GGCGACGGCG TCGAGCGCGC CATCGCGCGC
GCCGGCGAAC TCGAAACCCT GGTCGCCAAT GAAGTCTCGG CGCTGGAACG CGCCTACTCC
GACAACGAAG TCCGGATCCG CGCGCTGTTG CAGGACATCG CGCATCAGCG CGACAATCTG
GTCGGCCAGG CCGAGCAGGT GCGCAGCGCC ATCTCCGGCG TGCAGATCGA TTTGCGTCAC
GACATCGCGC TGATTTCCGA CGCGATCGCC TCGCGGGTCG ACGAAGTGGC CAAGAGCATC
ACCAGCGCGC TCGAAGAGCG CGGCGCGCAC ATCACCAGCG CCCTCGGCAA TGCCGGCGAC
AACATGATCC TCGCGCTCGG CGAGCGCGGC GGCGACCTGC TCGACCGCCT CGAGGAAGCC
AGCGCCGAGA CCACCCGCGC GGTGCTCGAC GCCAGCGAAC GGCTGACCGC CAGCCTGAAT
TTCAAGACCG GTCACGTCCA CGACGAATTC GTCGAACTCG CCGACCGTGT CCACGACATG
CTCAACGAAC GCCTCGACCG CATCACCGGC GACTTCGAAC AGCGTTCCGC CAGCATCGTC
GACGGCATCT CCGAGCGCAC CGAGCAGGTC CACGATTCGC TGAAGAACTC CAGCGACTCA
CTGCTGCTCG AACTCGAGCT GCGCAGCGGC GACCTCGTCA GCAAGATCGA CGACGCCGGC
AATCGCCTCG CCGACCAGAT CCTCACCAGC GGCGACAAGG CCAGCGAAGC GCTCGACGTC
ACCGTCAACA CGTTGGTGGC CAAGGTGGTC AGCCAGACCG AGAACGCCCA CGACTCGCTC
AGCCTGCAGA TGAGCTCGTT CGACGATCTG GTGAAGCAGC AGGGCTCCGA ACTCGCCGAG
AAGTTCGCGC GTGACAGCGG CACGCTGGGC GCGCTGATCA CCCGCCACAT TTCCGAATTC
GACCGTACCG TGAAGACCTA TGGCGGCGAG ATCGTCGACC GCATGGGCCA GCGCACCCAG
GATATTTCCA GCACCCTGAA GACCTATGTC GACAATTTCG ATCAGCGCGT CACTGCGCGC
GGCGACGAGA TCAGCGCCAC GCTGGATCAG CGCCTGTCGC ATTTCGAGAC CGTGTTCGAC
GCCCGCGTCA CCAGCCTCGA CGGCTCGCTC GACAGCAAGG TCAAGTCGCT CGACGACACC
GTCGGCGGCC ATCTGAAGTC GCTCGACGAC AGCTTCACGT CGCGTACCAA GTCGGTGACC
GAGAGCCTCG ACACCCGCAT CGCGCAGCTC TCCGACACGC TGACGATCGG CTCGATCGAG
GCGGTCGATG CCATCGACAA CCGGATTGCG CAGCTGTCTA CGACGCTGAC GAGCGGCTCG
ACGCAGGCGA TCGGCCTGAT CGACGACCGG ATCGCGCAGC TGTCGACCAC GATGTCGAGC
GGCTCGACGC AGGCGATCGG TCTGATCGAC GACCGGATCG CGCAGCTGTC GACCACGATG
TCGACCGGCG CCACTCAGGC GATCGATCTG ATCGACACCC GCATCGACCG GCTCGCCGAT
ACGCTGACCA CCGGCGCGGT CCAGGCGATC GAGTCGATCG ACGCCCGCCT GTCGCATCTG
ACCACGTCGC TGACCGACGG CACCGCCCAG GCGATCGGCG CGATCGACCA GCGCATCACC
AACGTCACCG ACACCATCGA CAGCCGCAGC ACCGGCCTCG CCGCGACCGT CAGCGCGCGC
TTCCAGGAAA TCCACGAGGG GCTCGAGAAC CGCGTCGGTA CGGTGCTCAC CGATATCGAT
CTGCGCGTGT CGCAGTTCGA AGACCTGCTC GGCTCGCGCG TCGACGCGGT GGCCGGCCGG
TTCGAGAACA CCGGCCGCGA GGCGAGCAAC CTGTTGATGG CGCGCGCCGA AGAGCTATCG
CTCGGCATCA AGTCGCACGT GTCGGACGCC GAACGTTCGC TGACCAACCT CGCCATCAGC
ACCAGCGACA CCATCCAGTC CGGCACTCGC TCGGCGAAGG ACGCCATGCT GTCGGTGTCG
ACCGAGGTCG GCGCCCAGCT GCAGCTCACC TCGGCCGAGA TCGAACGCGC GCTCACCGCG
GTCGGCACCA ACGCCGCGAA TTCGGTGGTG GTCAGCGCGA CCGAAGCGCA GGCCAAACTC
TCCGCGGTGT CGAGCGACAC CGTGGCCCAG CTCAAGTCGC TGTCCGCCGA CGTCGAGCGC
ACCCTCGCGG TCGCAGGCAC GTCGACCGCG GCTTCGGTCC TCGCCGGCGC GCGCGAAGCC
CAGAGCACGC TGGTCGCGAC CTCGAGCGAC ATCACCGCCG AGATCCGGAC GCTGTCGGCT
GAAATCCAGC GCTCGCTGAC CGATGTCGGC GGCGCCACCT CGGCCTCGGT GCTCAACAGC
GCCCGCGAGG CCCAGGCCAC CCTGGTGTCG TCGTCCTCCG ACGTCGCCAA TCAAATCCGA
TCGCTGTCCG CCGATATCGA GCGCACCCTC ACCAGCGCCG GTGACGTCAC CTCGGCGTCG
GTGCTGGCGG GCGCCCGCGA GGCGCAGGCC ACCCTGGTGT CGTCGTCCTC CGACGTCGCC
AACCAGATCC GCTCGCTGTC CGCCGATATC GAGCGCACCC TCACCGGTGC CGGCGACGCC
ACCTCGGCGT CGGTGCTGGC GGGCGCCCGC GAAGCCCACA GCACGCTGCT GTCGGCCTCG
ACCGAGGTCA CCGGGCAGAT CCGCTCGCTG TCCGCCGATA TCGAGCGCAC CATCACCGGC
GCTGGCGACT CCACATCGGC ATCGGTGTTG GCGGGGGCCC GCGAGGTGCA CAGCACGCTG
CTCTCGGCCT CGACCGAAGT CACCGGTCAG ATCCGCTCGC TGTCGTCGGA TATCGAACGC
ACGCTGTACG CCGCCGGCAA TGCGACGGCG GAATCGGTCC TCGGCGGCGC CCGCGCCGCC
CAGACCACGC TGATGGCGGC GTCAGAGGAA GCCGCAGAAC GCGTCAAATC GCTCAGCGCG
GAGGTTCAGC GCACGCTGTC CGAAGCTGGA TCGTCGACCG CAAGCAGCAT CGTCGCCGGC
GCGCGCGAGG CGCAGAACAC GCTGGTCGCC GCCTCCTCCG AGGCGTCGAG CCAGGTGATC
TCGCTGGCCA GCGACGTCGA ACGCAAACTG ACGGCGGCCG GCGCAGCCAC CGTCGAGACC
ATCCTGTCGG GAGCCCGCGA CGCCCAGCAC ACTCTGGTTG CGACCTCCAC CGAGGCGTCG
AACCAGGTCA TGGCGCTGAC CGGCGACGTC GAGCGCACGC TGACCGCTGC AGGCAGCGCC
ACCGCCGGCG CCATCCTCGC CAGCGCGCGG GACGTCCAGA GCACGCTCGC CAACGCGTCG
ACCTCGGCCT CCGATCAGGT CCGGTCGCTT GCTGCCGAGC TCGAGCGCAC CCTGATCACC
GCCGGCATGA CGTCCGCGGA ATCGATGGTC ACCGGCGCGC GTGAAGCGCA GTCGACGCTG
GTCAACGCCT CCGAGGAAGC GGCCAACCAC GTCAAGTCGC TGGCGATCGA TGTCGAGCGC
TCGCTGAGCT CGGCCGGCGT CACGGCGGCG ACCACCATCC TGGGCAGCGC CCGCGAGGTG
CAGGCGACGC TCACCAACAG CACCGCGGAA GCGGCCACGC AGATCAAGAC GATCTCCGCC
GATATCGAGC GCACGCTCGC GGCGGTTACC ATCAACACCA CCGACAACAT CCAGGCCAGT
GCGGCCGCCG CCCAGACCAC GCTGGTCTCG GTCTCGAACG AGGTCAGCTC GAAGATCAAA
TCGACTTCGG CAGACATCGA ACGGTCGGTG TTCGCCGCCA GCGGCAGCTT CGGCTCGACG
ATCTCCGCCA AGACCGACGA GATCGTCAGC TACGTGCAGC AACAGGCCGA CCGGCTGTCG
CATATCATCG ACAGCAAGCG CGGCGTGCTG GTCGAGGCCC TGTCGGGCAA GACCAACCAG
CTCACCGTCG ACATCGATCG CGTCACCACC GATGCGCTGA ACGCGATCGA GACTCGCGGC
AAGGCGTTCT CGAACTCGAT CACCACCAAC AGCAACGACG TCGCGCGCTC GATCACCGGC
GCCGGCGATC TGGCGACCGG CGCGATCAAC AAGTCGCTCA AGGACCTCGA ACTGGCCTCG
CGATCGGCGA TCGATCAGTC GCGCCAGGTG TCGGTCGCGG CCGTCACCGA GATGCAGGAG
ACCAGCAAGA TCCTGCGCTC CGATACGGTG GCGCTGTTCG AGCGGCTGCG CGAGGGCAAC
ATCCTGCTGC AGGAAGTGCT CACCGGCGCT CACGACAACC TCAACTCACT GGAGCGCGCG
CTGGTCACCC GCGTGGCGGA CTTCGTCGCC ACGATGAACG ACGTCAACGC CCGCAGCGGC
GCCGCCACGC AGGGCCTGGA AGATCAGCTC ACCGGCTTCC ACACCAAGAC CAGCAAGGCA
CTGTCCGACC TCAACGCGCT GTCCGTGCAG TTCGAGGCCC ACGGCCAGGC GCTGGCCGAA
GCCGCCGATC TGGTGCAGCA GAGCAACCGC TCGGCCTCGA CCTCGGTCAC CGAGCGCAAG
GAGTCGCTGG AATCGCTGGT CACCACCATC GACCTGCGCA CCGCCGATCT CGACCAGCGG
CTGAGCCGCT TCACCGGCCT GCTCGATGAA TCGCTCGCTG CCGCCGAGGA ACGGGCGCGC
GACATCGCGC GGATCGTGGC CGAGACCGCC GGCGCCGGCT CCGCCAGCAT CACCCAGCAG
TTCGAAGCGG TGCGCAGCGC CGCCGAAAAG GAGCGCCGCC TCACCGCCGA GACGATGCAC
CAGGTCTATC AGCAGGGCAC CCAGGAAGCC GACGCCCTGT TCAAGCAATC GGCCGACCGC
TTCTCGGCGA TCGTCCAGGG CATCAAGCAG ATGGCGTCGG AGATGCATAC CGAACTCGAA
GCCACCCGCG AAGAACTTCG TCGCGGCGTG CTCGAGATCC CGCAGGAGGC CGCCGAGAGC
ACCGCGCAGA TGCGCAAGGT GATCGTCGAC CAGATCGAGG CGCTGGCCGA GCTCAACCGC
ATCGTCGCCC GCCACGGCCG CGGCTTGGAC GTGGTCGGCA CGACGCGCGC CAGCGCAGCC
CGCGAGGAAG AGCCGATGCT GGCGACCGCC GGCGGCGGCC GCAGCGAAGC GATCTCGCGG
CCGGCCGAGC CGGTGTCGCG GGAGCCCGTG TCGCGGCAAT CGAGCCGACG TGACGCCAGC
GCATCGACCC TGCCGCCTCC GGACCTCGGA ATCGCCGGTC CTGCGCCGCG CCGCACCGAA
GCTCCGCCGG TCGCTCCGAC CGCCGCCGAT CAGGGCCGTG ACGGCTGGCT GTCGGACCTG
TTGAACCGCG CCGACACCGG CGCGGAGCGC GAGCCCCCGC GCGGCCGGAC GCCCCAGCAG
GCGATGAGCG GCAATCCGCT GGAATCGCTG TCGCTCGACA TCGGCCGGCT GATGGACCGC
AACCTTGTGC TGGAGATGTG GGACCGCTAC CAGCGCGGCG AAGCCAAGGC GTTCAGCAAG
CGGCTGTACA CCCCCGCCGG CCAGAAGGCG TTCGACGAGG TCGCCCGCAA ATATCGCAGC
GACCGCGCCT TCAAGCAGAC GGTGGACCGC TACATCACCG AGTTCGAGCG CCTGCTCGAC
GAGGTGGCGC GCGACGAACG CGGCCCGCAA GCGCTGCGCA CCCATCTCAG CTCGGAGACC
GGACTGGTCT ACACCCTGCT GGCCCACGCC GCGGGACGGC TGGGGTGA
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| Protein sequence | MANNPKKIKD PTEVALSAIQ EALNISDAPT TGDDQISVRS DGSPAITTPA AYNDGAPEPR
IAPDRPTFEQ ADERAFAQRP ANDDRETIGQ LLQALQKGRP SRNVYTLASI FAGVWVFGGI
VLTVSFLPSL QAMVGQGSGG TIALVGLVAL FLAPVMLFYF LASLTWRGQE LRMIAQSMAQ
VAMRFSEPEI AASDSVVTVG QAIRREVAAM GDGVERAIAR AGELETLVAN EVSALERAYS
DNEVRIRALL QDIAHQRDNL VGQAEQVRSA ISGVQIDLRH DIALISDAIA SRVDEVAKSI
TSALEERGAH ITSALGNAGD NMILALGERG GDLLDRLEEA SAETTRAVLD ASERLTASLN
FKTGHVHDEF VELADRVHDM LNERLDRITG DFEQRSASIV DGISERTEQV HDSLKNSSDS
LLLELELRSG DLVSKIDDAG NRLADQILTS GDKASEALDV TVNTLVAKVV SQTENAHDSL
SLQMSSFDDL VKQQGSELAE KFARDSGTLG ALITRHISEF DRTVKTYGGE IVDRMGQRTQ
DISSTLKTYV DNFDQRVTAR GDEISATLDQ RLSHFETVFD ARVTSLDGSL DSKVKSLDDT
VGGHLKSLDD SFTSRTKSVT ESLDTRIAQL SDTLTIGSIE AVDAIDNRIA QLSTTLTSGS
TQAIGLIDDR IAQLSTTMSS GSTQAIGLID DRIAQLSTTM STGATQAIDL IDTRIDRLAD
TLTTGAVQAI ESIDARLSHL TTSLTDGTAQ AIGAIDQRIT NVTDTIDSRS TGLAATVSAR
FQEIHEGLEN RVGTVLTDID LRVSQFEDLL GSRVDAVAGR FENTGREASN LLMARAEELS
LGIKSHVSDA ERSLTNLAIS TSDTIQSGTR SAKDAMLSVS TEVGAQLQLT SAEIERALTA
VGTNAANSVV VSATEAQAKL SAVSSDTVAQ LKSLSADVER TLAVAGTSTA ASVLAGAREA
QSTLVATSSD ITAEIRTLSA EIQRSLTDVG GATSASVLNS AREAQATLVS SSSDVANQIR
SLSADIERTL TSAGDVTSAS VLAGAREAQA TLVSSSSDVA NQIRSLSADI ERTLTGAGDA
TSASVLAGAR EAHSTLLSAS TEVTGQIRSL SADIERTITG AGDSTSASVL AGAREVHSTL
LSASTEVTGQ IRSLSSDIER TLYAAGNATA ESVLGGARAA QTTLMAASEE AAERVKSLSA
EVQRTLSEAG SSTASSIVAG AREAQNTLVA ASSEASSQVI SLASDVERKL TAAGAATVET
ILSGARDAQH TLVATSTEAS NQVMALTGDV ERTLTAAGSA TAGAILASAR DVQSTLANAS
TSASDQVRSL AAELERTLIT AGMTSAESMV TGAREAQSTL VNASEEAANH VKSLAIDVER
SLSSAGVTAA TTILGSAREV QATLTNSTAE AATQIKTISA DIERTLAAVT INTTDNIQAS
AAAAQTTLVS VSNEVSSKIK STSADIERSV FAASGSFGST ISAKTDEIVS YVQQQADRLS
HIIDSKRGVL VEALSGKTNQ LTVDIDRVTT DALNAIETRG KAFSNSITTN SNDVARSITG
AGDLATGAIN KSLKDLELAS RSAIDQSRQV SVAAVTEMQE TSKILRSDTV ALFERLREGN
ILLQEVLTGA HDNLNSLERA LVTRVADFVA TMNDVNARSG AATQGLEDQL TGFHTKTSKA
LSDLNALSVQ FEAHGQALAE AADLVQQSNR SASTSVTERK ESLESLVTTI DLRTADLDQR
LSRFTGLLDE SLAAAEERAR DIARIVAETA GAGSASITQQ FEAVRSAAEK ERRLTAETMH
QVYQQGTQEA DALFKQSADR FSAIVQGIKQ MASEMHTELE ATREELRRGV LEIPQEAAES
TAQMRKVIVD QIEALAELNR IVARHGRGLD VVGTTRASAA REEEPMLATA GGGRSEAISR
PAEPVSREPV SRQSSRRDAS ASTLPPPDLG IAGPAPRRTE APPVAPTAAD QGRDGWLSDL
LNRADTGAER EPPRGRTPQQ AMSGNPLESL SLDIGRLMDR NLVLEMWDRY QRGEAKAFSK
RLYTPAGQKA FDEVARKYRS DRAFKQTVDR YITEFERLLD EVARDERGPQ ALRTHLSSET
GLVYTLLAHA AGRLG
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