Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1549 |
Symbol | rbcL |
ID | 4022029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1726832 |
End bp | 1728250 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637961744 |
Product | ribulose bisophosphate carboxylase |
Protein accession | YP_568687 |
Protein GI | 91976028 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAGA GTTATCAGGC GGGAGTGCGG GAATACCGCG AAACCTATTG GGACCCTCAT TACACGCCGA AGGACAGCGA CATTCTCGCG GTGTTCAAGG TGATCCCGCA GGCCGGGGTG CCGCGCGAGG AAGCCGCCGC CGCCGTGTGC GCCGAGTCGT CCACCGCGAC CTGGACGACG GTGTGGACCG ACCTGCTGAC CGACCTCGAT TATTATAAGG GCCGCGCTTA CGCCATCGAA GACGTGCCCG GCGACGACGA AGCGTTCTAT GCCTTCGTCG CTTATCCGAT GGGCCTGTTC GAGGAAGGCT CGATCGTCAA CGTCTTCACC TCGCTGGTCG GCAACGTGTT CGGCTTCAAG GCGGTGCGTG CGCTGCGACT GGAAGACGTG CGCTTCCCGC TGTGGTTCGT CACCACCTGC GACGGCCCCC CGCACGGCAT TCAGGTCGAG CGCGACAAGC TCGACAAGTA TGGCCGCCCG ATGCTCGGCT GTACCATCAA GCCGAAGCTC GGCCTCTCTG CCAAGAACTA CGGCCGCGCC GTGTACGAGT GTCTGCGCGG CGGCCTCGAC TTCACCAAGG ACGACGAGAA CGTCAACTCG CAGCCGTTCA TGCGCTGGCG CGACCGCTTC GAATTCTGCC AGGAAGCGAT CGAGAAGGCC GAGCAGGAAA CCGGCGAGCG CAAGGGTCAC TATCTCAACG TCACCGCGCC GAACATGGAG GAAATCTATC GCCGCGCCGA GTTCGCCAAG GAGATCGGCT CGCCGATCAT CATGAGCGAC TATCTGACCA TCGGCTGGGC GGCGCATTCC AGCCTTTCGC GCTGGTGCCG CGCCAACGGC ATGTTGCTGC ACGTCCACCG CGCGATGCAC GGCGTGATCG ACCGCAACCC GCGCCACGGC ATCAACTTCC GCGTGCTCGC CAAGCTGCTG CGCCTGCTCG GCGGTGACCA TCTGCACTCC GGCACCGTGG TCGGCAAGCT CGAAGGCGAC CGTGCCGCGA CGCTCGGCTG GGTCGACCTG ATGCGGGAGC GCCACGTCAA GGAAGACCGC AGCCGCGGCC TGTTCTTCGA TCAGCCGTGG GGCCACATGG CGCCGGTGAT GCCGGTCGCA TCGGGCGGCA TTCACGTCTG GCACATGCCG GCGCTGCTCG CGATCTTCGG CGACGACGCG GTGTTCCAGT TCGGTGGCGG TACGCTCGGC CATCCGTGGG GCAACGCTGC CGGTGCGGCC GCGAACCGCG TCGCGCTCGA AGCCTGCGTG CGCGCCCGTA ACGAAGGCCG CGATGTGGAG CGCGAGGGCA AGGACATCCT CACCGCCGCC GCGCAGTCCA GCCCGGAACT GAAGGTGGCG ATGGAAACCT GGCGCGAGAT CAAGTTCGAG TTCGACGTGG TCGACAAGCT CGACGCGCCG CACCGCTAA
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Protein sequence | MLKSYQAGVR EYRETYWDPH YTPKDSDILA VFKVIPQAGV PREEAAAAVC AESSTATWTT VWTDLLTDLD YYKGRAYAIE DVPGDDEAFY AFVAYPMGLF EEGSIVNVFT SLVGNVFGFK AVRALRLEDV RFPLWFVTTC DGPPHGIQVE RDKLDKYGRP MLGCTIKPKL GLSAKNYGRA VYECLRGGLD FTKDDENVNS QPFMRWRDRF EFCQEAIEKA EQETGERKGH YLNVTAPNME EIYRRAEFAK EIGSPIIMSD YLTIGWAAHS SLSRWCRANG MLLHVHRAMH GVIDRNPRHG INFRVLAKLL RLLGGDHLHS GTVVGKLEGD RAATLGWVDL MRERHVKEDR SRGLFFDQPW GHMAPVMPVA SGGIHVWHMP ALLAIFGDDA VFQFGGGTLG HPWGNAAGAA ANRVALEACV RARNEGRDVE REGKDILTAA AQSSPELKVA METWREIKFE FDVVDKLDAP HR
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