Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1458 |
Symbol | |
ID | 4021937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1630304 |
End bp | 1631014 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637961652 |
Product | methionine sulfoxide reductase A |
Protein accession | YP_568596 |
Protein GI | 91975937 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0225] Peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTCCG TCAGCCGTCT TTCACGCCCA GCCGCCGCTC TGGCCGCGCT GGTTTTGTCC GCCGCCTTTG CGCCTGCGCT TGCCGCAGAG GACGCGGTGG TGATCCCGCC GCCTGCGGTC GACGCCACCG TCGCGGACGG GGTCCAGACC GCGATCTTCG CAGGCGGCTG TTTCTGGGGC GTCCAGGGCG TGTTCCAGCA TACCGCTGGC GTCGTCAACG CTGTGTCGGG CTATGCCGGC GGCAGCAAGG CGACGGCGAA CTACATGGCC GTATCGACCG GTGTGACCAG TCACGCCGAG GCGGTCGAAA TCAAGTTCAA TCCGAAACAG GTCAGCTACG GCAAGCTGCT TCAGATCTTC TTCTCGGTCG CGCATGATCC GACCCAGCTC AACCGGCAGG GGCCCGACAC CGGCCCGCAA TATCGCTCGG CGATTTTCAC CGCGAACGAC GAGCAGAAGA AGGTCGCAGA CGCCTACATC GCGCAGCTCG ACGCGGCGCG GGTCTACAAG AAACCGATCG TCACCAAGGT CGGCGCGCTG GAGGGCTTCT ATGCCGCGGA GGCGTATCAT CAGGACTACC TGACACTGCA CCCGACCCAG CCCTATATTG TCTATAATGA TCTGCCCAAG ATCGAAAACC TGAAGAAGCT GTTCCCGAAG GACTATCTCG AAAAGCCGAC GCTGGTGAGC AGCGCGAAGG TGACGAACTA A
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Protein sequence | MRSVSRLSRP AAALAALVLS AAFAPALAAE DAVVIPPPAV DATVADGVQT AIFAGGCFWG VQGVFQHTAG VVNAVSGYAG GSKATANYMA VSTGVTSHAE AVEIKFNPKQ VSYGKLLQIF FSVAHDPTQL NRQGPDTGPQ YRSAIFTAND EQKKVADAYI AQLDAARVYK KPIVTKVGAL EGFYAAEAYH QDYLTLHPTQ PYIVYNDLPK IENLKKLFPK DYLEKPTLVS SAKVTN
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