| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1443 |
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| Symbol | |
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| ID | 4021920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1611744 |
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| End bp | 1613288 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637961635 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_568581 |
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| Protein GI | 91975922 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02645] putative thymidine phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0271925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGCTT CCCACCTGTC CCGTCCACCG CTGACGATCC GGCGGATCAG CCTCGATACC
GGCCGCGAAA ATGTCGCGGT GATCTCGCGC CGCTCGCGGG CGTTGCGCGC CGACGTCTTT
CGTGGCTTCA GCCGGGTCGC GTTGCGCATC AACACCAAGG TGCTGCTGGC GACGCTGATG
ATCACCGACG ACGATGCGAT GATCGGCCCC GACGAACTCG GCCTGTCCGA GCCGGCGTTT
CGCCGCTTCA ACGAACCGGT TGGCAGCGCG GTGAGCGTGT CGCCGGCGCA GCCGCCGGCC
AGCCTCGACG CGGTGCGCGC CAAGATCCAG GGCCACACGC TGACGCCCGC GGAAATCACC
GCTGTCATCG ACGACGTCGC ACACTTCCGC TACTCCGACA TGGAGATCGC GGCGTTCCTG
ATCTCCGCCG CACGCTTCAC CTCGACCGAT GAATTGCTGG CGCTGGTCGA CGCCATGGCC
TCGGTCGGCA CCCGGTTGAA ATGGCAGAAC CCGATCGTGG TCGACAAGCA CTGCATCGGC
GGCATTCCCG GCAACCGGAC CACCATGATC GTGGTGCCGA TCGTCGCCGC GCAGGGGCTG
ATGATTCCCA AGACCTCGTC GCGCGCGATC ACCTCGCCGG CCGGCACCGC CGACACGATG
GAAGTGCTGG CGCGCGTCGA TCTCGACGTC GAACAGATGA AGCGGGTGGT CACCACTTGC
GGCGGCTGCC TGATATGGGG CGGCCACGTC AATCTGTCGC CAGCCGACGA CATCCTGATC
TCGGTCGAAC GGCCGTTGAG CCTCGACACG CCGGAGCAGA TGGTCGCTTC GATCATGTCG
AAGAAGCTCG CGGCAGGCTC GACGCGGCTC CTGATCGATT TTCCGGTCGG GCCGAGCGCC
AAGATCGCGA GCGCTTCCGA AGCGATGCGG TTGCGCAAAC TGTTCGAATT CGTCGGCGAT
CACTTCGGCA TCGCGGTCGA GGTGGTAACC ACCGATGGCC GACAGCCGAT CGGCCGTGGC
ATAGGCCCGG TGCTGGAAGC GCGCGACGTG ATGGCCGTGC TCGGCAACGA GCCGAACGCG
CCGGCAGATC TGCGCGAAAA ATCGCTGCGG CTCGCCGCGC ATCTGCTCGA ATACGACCCT
CTGCTGCGGG GCGGCGCCGG TTACGCACGG GCGAAGGAGC TGCTCGACAG CGGCGCGGCG
CTGAAGAAGA TGCAGCAGAT CATCGACGCT CAGGGGCCGT CCGTGTGCAA CTCCGAACTC
GGCAGCCATG CCGCCGACGT GCTCGCGCCG GCCGACGGCG TGGTCAACGG CATCGACTGC
CTGCGCATCA ACCGCCTCGC CCGCACCGCG GGGGCGCCGA TCGTGAAGGG CGCGGGCATC
GATCTGTTCA AGAAGATCGG CGACCGCGTC GATCAGGGAG AACCGATCTA TCGCATCTAC
GCCTCCGACC GCTCCGAGCT GGACCTTGCG ATCGCGGCCG CGGAAGCGGA GTCCGGTTTC
TCGGTCAACC ATCACTCTCC CGCCGCCGTG GAACCGGTGT CGTGA
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| Protein sequence | MNASHLSRPP LTIRRISLDT GRENVAVISR RSRALRADVF RGFSRVALRI NTKVLLATLM
ITDDDAMIGP DELGLSEPAF RRFNEPVGSA VSVSPAQPPA SLDAVRAKIQ GHTLTPAEIT
AVIDDVAHFR YSDMEIAAFL ISAARFTSTD ELLALVDAMA SVGTRLKWQN PIVVDKHCIG
GIPGNRTTMI VVPIVAAQGL MIPKTSSRAI TSPAGTADTM EVLARVDLDV EQMKRVVTTC
GGCLIWGGHV NLSPADDILI SVERPLSLDT PEQMVASIMS KKLAAGSTRL LIDFPVGPSA
KIASASEAMR LRKLFEFVGD HFGIAVEVVT TDGRQPIGRG IGPVLEARDV MAVLGNEPNA
PADLREKSLR LAAHLLEYDP LLRGGAGYAR AKELLDSGAA LKKMQQIIDA QGPSVCNSEL
GSHAADVLAP ADGVVNGIDC LRINRLARTA GAPIVKGAGI DLFKKIGDRV DQGEPIYRIY
ASDRSELDLA IAAAEAESGF SVNHHSPAAV EPVS
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