Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1438 |
Symbol | |
ID | 4021915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1605695 |
End bp | 1607341 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637961630 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_568576 |
Protein GI | 91975917 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGCGT CGGTGCGGGC GTCGCGTGTC GAATTCATCG CGCTCGGAAT CGCGCTGCTG GTTGGGCTGA TGGTCGCGGC GCCGGTGATC AGCCTCGCGG TGACCGCGCT GCAGCCCGCT GTCGATATCT GGCCGCATCT GCTCGCTTAC GTGCTGCCGC AGTCGCTGCG CGACACCGCG CTGCTGTTAG CGGGCGTCGG CACGCTGACC CTTCTGATCG GCGCCGGCAC CGCATGGCTG GTGTCGTCGC ATGACTTCCC GGGCCGCGCG CTGCTGATCT GGCTGCTGCC GCTGCCGCTC GCGGTGCCGA CCTATCTGTC GGCTTACGTC TATGTCGATC TGTTCGAGCC GCTCGGCCTC GCCCATCGCA CGCTGACGCT GCTGATGCCG GCGGCGGAGG CGGTGCATTG GCTGCCGCAT CTGCGCTCGC TGCCCGGCGC GGTGCTGCTG CTCGCTCTGG TGCTCTACCC TTACGTCTTT CTGTCGGCGC GCGCGGTGTT TCAGGCGCAA AGCGCGGATG CGATCGAGGC CGCGCGGACG CTGGGCGCCG GACGCTTCAC CATCCTGCGA CGCGTGATCC TGCCGATGGC GCGGCCGGCG CTCGCGGTCG GCGTGGCGCT GGCGGCGCTG GAGACGCTGA ACGACATCGG CGCCAGCGAG TATCTCGGCG TCCGCACCCT CACGGTCTCG GTGTTCTCGA CCTGGCTCAA CCGCGGCAGC CTCGCCGGCG CGGCGCAATT GTCGCTGGTG CTGCTCGGCT TCGCCGCGCT GCTGATCACC GTCGAGCGGA TCGGCCGCCG CAACGCCAAC GTCGAATTCT CCGCCGAAAA CCCGCGGCTG CGGCCGCGCA CGAAGCTGGC GGGCCTCAAG GGCTCCCTCG CCTTCGCCGC CTGCCTGCTG CCGGCGCTGC TCGGCTTCAT CGTGCCCGCC GCCTATCTGC TCGGCGAGAG CCTGCGTCGC AGCCTCGCGG GGCGGATCGA TCCGTCGCTG TGGCGCGATG CGCTGCATAC GGTGACGCTG GCGTCGATCG CGACGGCGCT GGCGCTGATG CTCGGCCTGA TCGTGATCCT CGCCGCGCGC TGGCGTCCCG GCCGGACCGC AACCGCGGCT GTCTCGGTGG CGCAGCTTGG CTACGCGCTG CCGGGGCTGG TGCTCGCGCT CGGCCTGCTG GCCCCGCTGC TGGCGCTCGA CGGCGCGATC GCCACGTTCG CGCAATCTAT CGGTCTTGCC TCGCCCGGCC TGCTGCTGAT GAGTTCGGGC GGCGCGGTGA TCGCCGCCTA TGTGATCCGC TTCCTCGCGG TGCCGACCGG TCTGCTGAAA GCCGGCTTCG AACGGATCCC GCGCGATTAC GACGACTCGG CGCGCGCCGC CGGCGCAAGC CGGCTGGTGA CGCTTGCGAA AATCGACCTG CCGCTGCTGA AGCCGGCGCT GCTGGGCGCC GCGATCCTGG TGTTCGTCGA TTGCCTGAAG GAACTGCCGG CGACGCTGCT GCTGCGGCCG CTGAACGTCG ACACGCTGTC GACCTCGATC TACCAATACG CCAGCCGCGG CAGCTTCGAG GAGGGCGCAC TCGCCGCCTT GATCATCGTC GCCGCCAGCA TCCCGCCGGT GATCTGGCTG ACGCGGTTTT CGGATTTGCC GGAGTGA
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Protein sequence | MRASVRASRV EFIALGIALL VGLMVAAPVI SLAVTALQPA VDIWPHLLAY VLPQSLRDTA LLLAGVGTLT LLIGAGTAWL VSSHDFPGRA LLIWLLPLPL AVPTYLSAYV YVDLFEPLGL AHRTLTLLMP AAEAVHWLPH LRSLPGAVLL LALVLYPYVF LSARAVFQAQ SADAIEAART LGAGRFTILR RVILPMARPA LAVGVALAAL ETLNDIGASE YLGVRTLTVS VFSTWLNRGS LAGAAQLSLV LLGFAALLIT VERIGRRNAN VEFSAENPRL RPRTKLAGLK GSLAFAACLL PALLGFIVPA AYLLGESLRR SLAGRIDPSL WRDALHTVTL ASIATALALM LGLIVILAAR WRPGRTATAA VSVAQLGYAL PGLVLALGLL APLLALDGAI ATFAQSIGLA SPGLLLMSSG GAVIAAYVIR FLAVPTGLLK AGFERIPRDY DDSARAAGAS RLVTLAKIDL PLLKPALLGA AILVFVDCLK ELPATLLLRP LNVDTLSTSI YQYASRGSFE EGALAALIIV AASIPPVIWL TRFSDLPE
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