| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1342 |
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| Symbol | fixJ |
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| ID | 4021819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1511019 |
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| End bp | 1511636 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637961535 |
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| Product | response regulator FixJ |
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| Protein accession | YP_568481 |
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| Protein GI | 91975822 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4566] Response regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.400465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCATA AGGGAATCGT CTATGTGATC GACGACGACC AGGCGATGCG GGAGTCGATC
GACTTCCTGC TCACCTCCGC CAATTACGAA GTCCGCCTGT TTGAATCCGC GCCGGCCTTT
CTCGATGCCA TGGCCGATGT CGAATTCGGC TGCGTGCTGT CCGACGTGCG AATGCCCGGA
ATCGATGGGC TCGATTTGTT GAAACGGCTG AAGGCCAGCC GGAGCCGGTT GCCAGTCGTG
ATCATGACCG GGCACGGCGA CGTCCCGCTC GCGGTCGAGG CGATGAAGCT CGGCGCGATC
GACTTCATCG AGAAGCCGTT CGACGACGAC CGGCTGATCG GCATGATCGA GACCTCCCTG
AAACTGGCCG GCGAAGAGGC CAAGAGCGAA GCGGTGTCGC AAGATATCGT GGCGCGAATC
CAGTCGCTCA GCCCGCGCGA GCTTCAGGTG ATGGAGGGGC TGATCGCCGG AATGTCGAAC
AAGGCGATCG CCCGCGAGTT CGATATCAGC CCGCGTACCA TCGAAGTCTA CCGCGCCAAC
GTCATGACCA AGATGCAGGC CAGCAGCCTG TCGGAACTTG TCCGGATGGC GATGCGTGGC
GGCGTGATCA AGGATTGA
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| Protein sequence | MPHKGIVYVI DDDQAMRESI DFLLTSANYE VRLFESAPAF LDAMADVEFG CVLSDVRMPG
IDGLDLLKRL KASRSRLPVV IMTGHGDVPL AVEAMKLGAI DFIEKPFDDD RLIGMIETSL
KLAGEEAKSE AVSQDIVARI QSLSPRELQV MEGLIAGMSN KAIAREFDIS PRTIEVYRAN
VMTKMQASSL SELVRMAMRG GVIKD
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